KEGG   Shewanella bicestrii: CF168_05720
Entry
CF168_05720       CDS       T05197                                 
Name
(GenBank) ribonuclease 3
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sbj  Shewanella bicestrii
Pathway
sbj03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:sbj00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    CF168_05720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sbj03019]
    CF168_05720
   03009 Ribosome biogenesis [BR:sbj03009]
    CF168_05720
   03036 Chromosome and associated proteins [BR:sbj03036]
    CF168_05720
Enzymes [BR:sbj01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     CF168_05720
Messenger RNA biogenesis [BR:sbj03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     CF168_05720
Ribosome biogenesis [BR:sbj03009]
 Eukaryotic type
  90S particles
   RNase
    CF168_05720
 Prokaryotic type
  rRNA processing factors
   CF168_05720
Chromosome and associated proteins [BR:sbj03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     CF168_05720
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2
Other DBs
NCBI-ProteinID: ASK68408
UniProt: A0A220UJP8
LinkDB
Position
1298038..1298718
AA seq 226 aa
MEPIKNLPRLCRTLGYEFKNLELLTQALTHRSAANKHNERLEFLGDSILSIVISDALYHQ
FPKATEGDLSRMRATLVRGDTLTLIAKAFKLGDYLFLGPGELKSGGFRRESILADAVEAI
IGAIYLDSDLEVCRKLLLHWYAERLAEIQPGVNQKDAKTLLQEYLQGLKKPLPDYQVINI
EGDAHDQTFTVECRIDDLSESVIGVASSRRKAEQIAAAQVLELLKK
NT seq 681 nt   +upstreamnt  +downstreamnt
atggaaccgattaaaaatttgccacgtttgtgtcgtactttgggctatgagttcaagaac
cttgagcttctcacccaagcgttgacccacagaagtgcggcaaataagcacaacgagcgg
ttagagtttttaggcgattcgattttatcgattgtgatttctgacgctttataccatcag
tttcctaaggcgactgagggtgacctgagccggatgcgtgccaccttagtgcgtggcgat
acgctcaccttgattgctaaggcctttaagcttggggattatttattcttaggccccggc
gagttaaagagcggtggttttagacgtgagtctatcttggccgacgcggtcgaggcgatt
atcggcgcaatctacttagattccgatctcgaagtgtgccgtaagctgttactgcattgg
tacgctgagcgtttggccgagatccaaccgggcgtgaatcaaaaagacgctaaaacctta
ctgcaagaatatttacaagggttaaagaagccgctacccgattaccaagtaatcaatata
gaaggcgatgcccacgatcaaacattcaccgttgaatgtcgtatagatgacttgagcgaa
agcgtgattggcgtagcgagttcgcgccgcaaagccgagcagattgccgcggctcaagta
ttggagttactgaagaaatga

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