Shewanella bicestrii: CF168_06255
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Entry
CF168_06255 CDS
T05197
Name
(GenBank) GGDEF domain-containing protein
Organism
sbj
Shewanella bicestrii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
5TM-5TMR_LYT
PAS_9
PAS
PAS_8
PAS_4
PAS_11
PAS_7
Cas10-Cmr2_palm2
Motif
Other DBs
NCBI-ProteinID:
ASK68503
UniProt:
A0A220ULF5
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Position
1423827..1426856
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AA seq
1009 aa
AA seq
DB search
MDKSIFLPLVQNAALLLALVFLYDAIPKKHQRQYFLLWRLGIGLLIGGIGVTIMSTPWMY
EPGIIFDTRSVLLCVTGLFFGGLPTAVAVIITGIYRYSIGGAAMWVGLGVIMSSGLIGVL
WRQQRKSYLANISGREIFSFAFVVHIVMLLWFFLLPDKIAIPVLQKIMLPVLTIYPLATW
LLSRLLSRRFELERDEQIRLQDDFLFRSQFNVGNIGIAITGVDQKWIKVNPRLCQMLKYS
EDELLHMTWKQLTHPDDVEADIVKFELMLAGKIDNYEMDKRFIAKDNSIVYTHMTVACKR
ANHNVLLVIAGYLDVTAQTLADREVLASREQLELVLSSSDLGVWDWDIRNDHIERNARSA
DILGCDIDMLNANSRQWMDSIVAEDRPKVLHSIEAHIRGETPQHKMEYRLKTLNRDIRWI
LDTGKVVSRDANNNALRMCGTYTDITEAKLIEESLKLSALVYDNSSEAMSVLDETGIIIT
VNAAFTAITGYSESEIRGQHIRMLYCDLNGHGFYTEMNNEIREKGEWQGEMRQRRKNNEE
YVIWLTINTIKDKDGQPYRRVALFSDITDKKQSEHLIWKQANYDTLTGLPNRRMLLEYLS
AEIKSADRNRNHFALMFLDLDYFKEVNDTLGHAMGDLLLIETASRLKSCVRDTDVVARLG
GDEFTVVLSAMEDHKGIERVAEHILRRIAEPYVLGEETAYISASIGITLYPDDATSIEGL
LKHADQAMYAAKDQGRNRFNYFTPSMQEYAKYRMRLIQDLRQAVVNKEFELHYQPIVTMT
TGEVLKAEALLRWFHPERGYVSPAEFIPVAEDTGLIVEIGNWVFEQAARQSAQWRKTLGV
EIQISVNKSPIQFRDEGTLLHNWLELLQELDVTGTGVCVEITEGLLLDASMGVTEKLLAY
RDAGVQVSLDDFGTGYSSLAYLKKFDIDYLKIDQSFTRNIDTDESDQTLCEAIIVMAHKL
GMKVIAEGVETEAQRQVLLNAGCDYGQGYLFSKPVSASEFARQHLVKEA
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagcattttcttacccttagtacaaaatgcggcgttactgctcgccttggta
tttttgtacgatgcgattcctaaaaagcatcagcggcagtattttcttctgtggcggctg
gggatcggattactcataggtggcataggcgtcacgattatgagtaccccatggatgtac
gaacccggcattatcttcgacactcgctctgtgctcttatgtgttaccggcctctttttt
ggtggtttgcctactgcggtggcggtgattatcaccggaatttatcgttacagtattggc
ggcgccgccatgtgggtgggattaggcgtgattatgtcctcgggcttgattggcgtactc
tggcgtcaacagcgtaaatcttaccttgccaatatctcgggcagagaaatcttcagtttt
gcctttgttgtccacatcgttatgttgttgtggttctttttgctgccggacaagattgcc
attcccgtgttgcaaaaaatcatgctgcccgtgctaaccatttatcccctcgcgacttgg
ctactgagccgtttgctgtcccgccgttttgagctggagcgtgacgagcagatccgtttg
caggatgattttttattccgcagccaatttaacgtcggcaacatagggattgctattacc
ggcgttgaccaaaagtggatcaaggtgaatccaaggctgtgtcagatgctgaaatactca
gaggatgagttgctgcatatgacctggaaacagctcacccatcccgatgatgtcgaggct
gatatcgtcaagtttgaactcatgctcgcgggcaaaattgataactatgagatggataaa
cgctttatcgcaaaagataattcgattgtatatacccatatgacggttgcctgtaagcgc
gcgaatcataatgtgttattggtgattgcgggttatttggatgtcactgcacagaccctg
gccgatagggaagtgctcgccagtcgtgagcaacttgaattggtgttaagcagtagcgac
ttgggtgtttgggactgggatatccgtaatgaccatatcgagcgtaacgcccgcagcgcc
gatatcctaggttgcgatattgacatgctcaatgccaatagccgtcaatggatggactcg
attgttgctgaagataggcccaaggtgctgcactccatcgaggcccatattcgcggagaa
acgccgcagcataagatggaatatcgcttaaaaaccctcaaccgcgatattcgctggatt
ttagatacgggcaaagtggtgagccgtgatgccaataacaatgccttaagaatgtgtggt
acctatacggacatcaccgaggccaagctcatcgaagaatccttaaagctgtctgcactg
gtgtatgacaacagctcagaggccatgagcgtgctcgatgaaaccggcattatcatcaca
gtcaacgccgcctttaccgctattacgggttacagcgagtcagaaattcgcggccagcat
attcgcatgctctactgcgatctcaacggtcacggcttttataccgagatgaataatgaa
atccgcgaaaaaggcgagtggcagggggaaatgcgtcagcgacgtaagaacaacgaagag
tacgttatttggctcaccatcaacaccatcaaagataaagatggccaaccctatcgccgt
gtggcgctgttttccgatatcacagataaaaaacagagcgagcatttgatctggaaacag
gccaactacgacacgctcacgggcttgccgaatcggcgcatgttgctcgaatatttaagc
gccgaaatcaagagtgctgaccgcaatcgcaatcactttgccttgatgttcctcgatctg
gattactttaaagaagtgaacgacacccttggtcatgccatgggggatctattgctgatt
gaaaccgccagtcgcttaaaatcctgtgtgcgggataccgatgtggtggctcgtctcggt
ggggatgagtttactgtggtgctcagcgccatggaggatcacaagggcattgagcgggtc
gccgaacacattttacgccgcattgctgagccctatgtgctgggtgaggaaaccgcctat
atcagcgccagtattggcatcaccctttatcccgatgatgcgactagcattgaaggcttg
ctcaaacatgcggatcaggccatgtatgcggcgaaagatcagggccgcaatcgtttcaat
tacttcaccccttcgatgcaggaatacgccaaatatcggatgcgcttaatccaagatttg
cgccaggccgtggtgaataaagaatttgaactgcactaccagccgatagtgaccatgacc
acgggcgaggtgcttaaggccgaagcgctattgcgttggttccacccagagcggggttat
gtttcccctgcggaatttattcccgtcgccgaagataccgggctgattgtcgagattggc
aactgggtctttgagcaggcggcgcgccaaagcgctcagtggcgtaaaacacttggagtt
gaaattcaaatcagtgtcaacaaatcacccatccagtttcgcgatgaaggcacgttgctg
cacaattggctcgagttactgcaggaattggatgtgacaggcacaggggtgtgcgtcgag
atcaccgaaggattactcctcgatgccagtatgggcgtgaccgaaaaactcttggcctat
cgggacgcgggcgtacaagtctccttggacgactttggtacgggttattcctccttggcg
tatttgaagaagttcgatatcgattatttaaaaatcgatcaatcttttacccgcaatatc
gacacagatgaaagtgaccaaaccctgtgcgaggcgattatcgttatggcccataaactc
gggatgaaagtgatcgccgaaggggtcgaaaccgaggcgcagcgccaagtgctgctcaat
gcgggctgcgactatggccaaggctatttattttctaagcctgtgagtgccagcgaattt
gcgcgtcagcatttggttaaagaggcttag
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