Shewanella bicestrii: CF168_06380
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Entry
CF168_06380 CDS
T05197
Name
(GenBank) transcriptional regulator GcvA
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbj03000
]
CF168_06380
Transcription factors [BR:
sbj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CF168_06380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
KDM5_C-hel
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ASK68528
UniProt:
A0A220UK19
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Position
1456868..1457779
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AA seq
303 aa
AA seq
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MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFTQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLSKFSEKN
PDIDVRIKAVDTEASSLTDDVDVAIYYGLGNWPGLRADKLRNEVLIPVCSPMLLNGPKPL
SKPEDLKYHTLLHDMSRHDWQAWFRQCGIHDINVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVCPFQEVLVSKDAYYLVCQQNHAELGKVVAFREWMLDMFAEESRSEL
LPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgcttaccaccactgaatgcggttaaagcatttgaggccgccgcacggcat
ttgagctttactcgagcggctgaagaattgtttgtgactcaggctgcggtgagtcaccaa
attaaggcgctggaagattttctcggattaaaattatttcgccgaaagaatcgttcgctg
ctgctgaccgaagaaggtcagagctattttctcgatattaaagatatcttcactcaactg
gcggatgcgaccgacaggctgctcgcacgtagcgccattggttcgttgaccgtgagtatg
tcgcccagttttgcgattcagtggctggtgccgcgcctgtcgaagtttagtgaaaaaaat
cccgacattgacgtacgaattaaagcggttgacacagaggccagctccttaaccgacgat
gtcgacgtcgccatttattatggtttaggcaattggccgggactgcgcgccgataaactc
cgcaatgaagtgctgatccctgtatgttcgcccatgctgttaaacggccctaagccgtta
tcaaagccggaagatttaaaataccacaccctgctgcacgatatgagccgccacgattgg
caggcttggtttagacaatgtggcattcacgatatcaacgtcaaccaagggccgattttc
agtcattcctccctcgttttgcaggcggcggcccacggccaaggtgtggccttgggttat
agcgtactcgctcgccccgatattaaggcggggcgactggtgtgcccattccaagaagtg
ttagtgagtaaagatgcttattacctcgtctgccaacagaatcatgccgagctcggtaaa
gtggtcgcgtttcgtgagtggatgttagatatgtttgccgaggagtcacgcagtgagttg
ttgcccggataa
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