Shewanella bicestrii: CF168_06645
Help
Entry
CF168_06645 CDS
T05197
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
Organism
sbj
Shewanella bicestrii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
HTH_30
MCM
HTH_28
AAA_16
AAA_22
HTH_Tnp_ISL3
HTH_7
Phage_CP76
HTH_50
HTH_23
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ASK68577
UniProt:
A0A220UK67
LinkDB
All DBs
Position
1518908..1520317
Genome browser
AA seq
469 aa
AA seq
DB search
MIRPTLFYHLQDFETEQALVQLEGAQTYNKLRSTDDLSWISQLEANRIDVAIIELPRLSR
EDYLALLESSAIADVEFIFLSDGLPNPHLDKLLSKYAGYHFRKPIDMSLLCETLADFAQH
LVANTSTRIRPFASELDQYGLLVGSSLPMHRLYRTIRRVSAAESNVLIIGESGAGKELVA
NTIHLASPRVNKPYIAINCGALSPELVDSELFGHVKGSFTGANRDHQGVFEQAEGGTLFL
DEVTEMPLEHQVKLLRVLENNEYRPVGSPKVLKANVRIVAATNRDPLVAIEQGQLREDLY
FRLAHFPIQVPPLRERGEDIVGLAKHFLAYRNAAEKQSKVFSPSSLEAIAAHAWPGNVRE
LKHAIERAYILADHEITPEHLQLTPSLDKEATAEENVVIPQGMRLEELEKIAIYQALETS
LGNKTDTAEQLGISVKTLYNKLSKYEQESDAQTVVDAVSEDSVSNSVAK
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatccgaccaacgcttttctatcatctacaggacttcgagaccgagcaggcattagta
cagctcgagggcgcgcagacctacaacaagctacgcagtaccgatgatttatcttggatt
agtcagctggaggccaatcgtatcgatgtggcgatcattgagctgccccgtctaagccgt
gaagattatttagccttactcgagtccagcgccattgcggatgtggagtttatttttctc
tccgatggcctgccgaatcctcacctcgataaactcttgtccaaatacgcgggctaccat
ttccgtaagcccatcgatatgtcgttgctgtgcgaaaccttagcggattttgcccagcat
ttagttgccaatacttcgacgcgcattcgtccctttgccagcgaattagaccaatatggt
ctgctggtgggctcctcattacctatgcaccgtttgtatcgcactatccgccgcgtgtcg
gccgccgagagcaatgtgttgattatcggtgagagtggcgcgggtaaagaactggtcgcc
aataccattcacttagccagcccgcgggtgaataagccctatattgcgattaactgcggc
gccttgagcccagaattggttgatagtgaactcttcggccatgtaaaaggctctttcact
ggcgcgaatcgcgatcatcaaggggtatttgagcaggccgaaggcggcaccttatttctc
gatgaagtcaccgaaatgcccctagagcatcaagttaagctgttaagagtgctcgaaaat
aatgaatatcgtcccgtcggcagccctaaggtgctcaaggcaaatgtgcgtattgtggcg
gcgacaaaccgcgatcctttagtggcgattgagcaaggacaactgcgggaagatttgtac
tttcgcttagcgcatttccccattcaagtgccgccattgcgggagcgtggggaagatatt
gtcggacttgcgaagcattttctggcctatcgcaatgcggcagaaaaacagagtaaagtg
ttctcgccctcaagtttagaggcgattgcggcccacgcttggccggggaatgtgcgcgag
ttaaagcatgctatcgagcgcgcttatattctggcggaccatgagattacccctgagcat
ttacagcttacgcccagtttggataaagaggcgactgcagaggaaaatgtcgtgatcccc
caaggtatgcgccttgaggagctggaaaaaatcgccatttaccaagcgcttgaaacgagt
ctgggcaataagaccgacaccgccgagcagcttgggatcagcgttaaaaccctctataac
aagctcagtaaatatgagcaggagtcagatgctcaaactgttgttgatgccgttagcgaa
gattccgttagcaatagcgtcgccaagtag
DBGET
integrated database retrieval system
