Shewanella bicestrii: CF168_09585
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Entry
CF168_09585 CDS
T05197
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CF168_09585 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_09585 (recC)
Enzymes [BR:
sbj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CF168_09585 (recC)
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CF168_09585 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ASK69106
UniProt:
A0A220UMG0
LinkDB
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Position
complement(2182358..2186062)
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AA seq
1234 aa
AA seq
DB search
MLKLIQSNQMEVLCAHLAAYLRQPLPGAGLLQSEHILVQSPGMSTWLRLEIAKQNGIAAA
LEFPLPSSFIWQLCHDLLPNVPKENAFTKAAMTWKLMQLLPRLLDEPSFGPLRHYLGHTL
DNLESSTVDTHSNHQHGAVSADDIKLYQLCGRIADIFDQYLVYRPDWIAAWEANEPLESL
KLNEEQSWQPILWRALIAYNRDELRQSHYHRANLHQDLIAALGDSANSLAKLPQRLFVFG
ISSMAPQTIDVLHQLASRIDVIILSLSPCQHYWGDIIDPRHRARMALQYAGKRQLAEQWE
DKLEVGNPLLANNGKMGRELLDMLLELPPEHCDFGDDVYCEPCGDPNDPHANASMLAGVQ
YDILEMQTLDRVLGPDAELYQEVANRRVLTADDDSILIKSCHSPLREVETLHDHLLDLLD
SNNQLTPKDIVVMMPDVAAYAPYIDAVFAAKQGLEYIPYAIADRGAAQESPLINSFLNLL
NINQSRFGLTDILSILEVPAILRRFQLEEDELPLIRRWLDEAGVRWGRDEQSRLKQGVPA
FEQNSWAFGIKRLILGYALRDDAPLYQSSPQGMHYLTVAGVEGQSAQALGKLLNFIEVLD
ETTQVLAKAQAPSLRLLELTELLNAFYAPDEDEREQLQEIRDAIAALEQELLAASPADIG
PQANDLDLSIEVLALWFNQRLTESRVGQRYLAGSVNFCTLMPMRSIPFKVVCLLGMNDGV
YPRVQHPVGFDLMAHLGARKGDRSRRLDDRYLFLEALLSARQQLYISYIGRSERDNSERI
PSMLVSELIEYCQLCYLPESLAAQASIVNNEVAQQALIEAIVSHQPLQPFDPKLYQAALP
QAPTSHGIKQSYSQQWCPPDSNSQLQPGRFIEAHTQIVLEDDAIGDSVQDIAPLGEAEHV
DISAFIRFFRNPAQYFFNRTLKVDLNLNIQADDNDEPFSLNALERYLLQAQLLGDALEQG
QNGPSTELLQRLKASGNLPMQPFDDLLLRQYSHDIAPLIGRTLFMRGDVAPRHADIRLSF
ELPHQNAGTQVKTKRVLLEGRIDDISPKGLVTCRPGSAHGRDILALYLRHLCLMAAGVAQ
PSSLQPSYLLDMGHFHALSPITPELAHAQLANLLQLFYQGQIHPLCFMPRTSLAYASAEA
DEEEEPHTSKDPHKARLEAAQSEWLDEQGELGEGTDPHYQRLFHFPDDFTEAHFGKLADD
IYRPMLSLYHKDTLAQLEEFALNEAPTASSEGAL
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagttaatccaatccaatcaaatggaagtgctctgtgcccatcttgccgcgtat
ttgcgccagccgctacccggcgcggggttattgcaaagtgagcatattttggtacaaagc
cctgggatgtcgacttggttacgccttgaaattgcaaaacaaaatggtattgccgccgcg
ctggagttcccgctaccttccagctttatttggcaactgtgccacgatttactccccaat
gtccccaaggaaaacgccttcactaaggcggctatgacctggaagctaatgcagctgctg
ccacggctactggatgaaccttcttttgggccactgcgccattatttgggccatacctta
gataatctcgaatcgagcacggttgacacccatagcaaccatcaacatggtgccgtaagc
gccgatgatattaagctttaccaactttgcggccgcatcgccgatatcttcgaccaatat
ttggtttaccgccccgactggattgccgcgtgggaagccaatgaaccgctcgaatcgctc
aaattgaatgaggagcaaagctggcaacccatcctctggcgcgcgctgattgcctacaat
cgtgatgagctgcgtcaaagccactaccatagggccaatctgcatcaggatttgattgct
gcattgggggatagcgccaattcactcgcaaaattgccgcagcgtttatttgtgtttggg
atctcctccatggcgccccaaaccatcgatgtgctccaccagctcgcgagccgcatcgat
gtgattatcttaagcctgagcccctgtcagcattactggggcgacattatcgacccacgc
catcgggcgcgtatggcattgcaatatgccggaaaacgccaattagctgagcaatgggaa
gataaactcgaagtcggcaatcccctgctcgccaacaatggcaagatgggccgcgaatta
cttgatatgctgctcgagctgccccctgagcactgtgactttggcgacgatgtgtactgc
gagccctgcggcgatcctaacgatccccacgctaacgcaagtatgctggctggtgtgcaa
tacgatattttagaaatgcagacactcgatcgcgtactcgggccggatgctgagctatat
caagaggtcgcgaatcgccgggtattaacagccgacgatgattcgattctaatcaagagt
tgccacagcccacttagggaagtcgaaaccctgcacgatcatttactcgacctgctggat
agcaacaaccaactcacgcccaaagacatagtggtcatgatgccggatgtcgccgcctac
gccccctatatcgatgcggtgtttgcggccaaacagggactggaatatatcccctacgcc
attgccgaccgcggcgcggcgcaggaatcaccactcataaatagctttttgaatttactc
aatattaatcagagccgtttcggactgaccgatattttaagcattctcgaagtcccagcc
attttgcgacgttttcagctcgaagaagacgagctgccactcattcgccgctggttagat
gaagcaggggtgcgttggggccgcgatgaacagagccgccttaaacagggcgtgcctgct
ttcgagcaaaactcctgggcctttggtataaaacgcttaatcttaggttacgccttaagg
gacgatgcgccgctctatcaatcatccccgcagggaatgcactatttaaccgtggctggg
gtggagggccaatcggcacaggcccttggcaaactgttgaattttattgaagtcctcgat
gagaccacccaagtattagccaaggcgcaagcgccctcactgcggttactcgaactcacc
gagctgttaaatgccttttacgcccccgatgaggacgagcgtgaacagctgcaagaaatt
cgcgatgcgattgccgccttagagcaagagctgcttgccgccagcccagccgatattggc
ccacaagccaacgacttagatttaagcatcgaagtgttggcgctctggtttaatcaacgc
ttaaccgagtcacgcgtcggccaacgatacctcgcgggcagcgtaaatttttgtacctta
atgccgatgcgctcgattcccttcaaggtggtttgcctgctggggatgaatgatggtgtc
tatcctagggtgcaacatcctgtggggtttgatctgatggcccatttgggtgcgcgcaaa
ggcgatcgttcccgcagattagatgatagatacctgtttttagaggcgctgctttcagca
cgccagcaactttacatcagttatattggccgtagcgaacgggataactctgagcgtatt
ccatctatgctggtttccgagctaatagaatattgccagctatgttatttacctgaatcc
cttgcggcgcaagcatctattgtcaataacgaagttgcccaacaggcattgattgaggct
attgtgagccatcagccgctgcaaccttttgatcctaaactgtatcaagcagcactaccg
caagcccctacctcccatgggataaaacagagttatagccagcagtggtgtccgcccgat
agcaatagccagttgcagcctggtcgatttatcgaagcccatacccagatagtgctcgaa
gatgacgcaattggtgacagtgttcaggatattgcgccccttggcgaagcggagcatgtc
gatatctctgcctttattcgcttctttcgcaatcccgcgcagtatttctttaatcgtacc
ctaaaagtcgatttaaacctgaatattcaagcggatgataacgatgagccctttagtctt
aatgcgttagagcgctatttattacaggctcagctccttggcgatgcgctcgagcaaggg
caaaacgggcccagcactgaactgttacaacgccttaaggccagcggtaatttgccaatg
cagccctttgatgatctgctgctgcgccaatacagccatgatattgcgccgctgattggc
agaaccctgtttatgcgcggtgatgtcgctccccgccatgccgatattcggctcagcttt
gagttaccccaccagaacgcagggactcaggtaaaaactaaacgcgtgctcctcgaaggt
cgaatcgatgatatcagccctaaaggattggtgacttgtcgccccggcagtgcccatggg
cgggatattttagccttgtatttgcgtcatttatgtttgatggccgcaggagtggctcaa
cctagcagcctgcaacctagctacctgctggatatgggccattttcatgccctctcgccc
attacgccagagcttgcccatgcgcagctcgccaacttattacagcttttttatcagggc
caaattcatcccctgtgttttatgccaagaacctccctcgcctatgccagtgcagaggcg
gatgaagaggaagagccgcacacaagcaaagacccgcacaaagcccggctcgaagcggca
caaagcgaatggctggacgagcaaggtgaacttggcgaaggcacagatccccattatcag
cggctgtttcattttcccgacgactttaccgaggcacattttggcaagctcgccgatgac
atctatcggccaatgcttagcctctaccataaggataccctcgcccaactcgaggaattt
gccctgaatgaagccccaaccgccagttcagagggagcactctga
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