Shewanella bicestrii: CF168_09915
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Entry
CF168_09915 CDS
T05197
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sbj
Shewanella bicestrii
Pathway
sbj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CF168_09915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_09915
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CF168_09915
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CF168_09915
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
AAA_22
Kinesin
DUF2963
Ish1
Motif
Other DBs
NCBI-ProteinID:
ASK69162
UniProt:
A0A220UMQ3
LinkDB
All DBs
Position
2263078..2265099
Genome browser
AA seq
673 aa
AA seq
DB search
MSESVFQLESQFAPAGDQPTAIAKLVDGLESGLACQTLLGVTGSGKTFTIANVIAQLGRP
TIIMAPNKTLAAQLYGEMKEFFPNNAVEYFVSYYDYYQPEAYVPASNTFIEKDASVNAHI
EQMRLSATKALLERKDVVLIASVSAIYGLGDPDSYMKMLLHLRQGDTMGQRDILKRLSEL
QYTRNDLELQRGTFRARGEVIDIFPADSDRYGIRVELFDDEIERLSEFDPLTGQIVKRIA
RTTVYPKTHYVTPREKILEATELIKEELRERKQYLLDNNKLIEAQRIHERVQYDIEMMVE
LGYCSGIENYSRYLSGRAPGEGPPTLLDYLPADGLLIIDESHVTVPQIGAMYKGDRSRKT
TLVEYGFRLPSALDNRPLKFEEFEQLMPQTIYVSATPNPYELDKSGGEIVEQVVRPTGLL
DPELEVRPVSIQVDDLLSEVAKRVAVNERVLVTTLTKRMSEDLTEYLDEHGVKVRYLHSD
IDTVERVEIIRDLRLGKFDVLVGINLLREGLDMPEVSLVCILDADKEGFLRSERSLIQTI
GRAARNVNGKVILYADRITQSMAKAMGETERRREKQHAYNLEHGIVPKGVVKRITDVMDI
DDGRDTEKGYSPSSLGKVAEPKAKRYQPDAAQLSHDIDKLEKQMHEHARNLEFEQAAALR
DEVKRLRELLITA
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagaatctgtttttcagcttgaatctcaatttgctcccgcaggggatcagcccacg
gccattgccaagttggtcgatggcttagaatcgggcctagcttgccaaaccctattgggg
gtaacgggctcgggcaagacattcactatcgccaatgtgatcgcccaattggggcgccca
accattattatggcgccaaacaagacgctggcggcgcagctttatggtgagatgaaagag
tttttccccaataatgcggtggaatactttgtctcctattacgattattaccagccagaa
gcctacgtgcccgcatcgaacacttttattgaaaaggatgcgtcggttaacgcccatatc
gagcaaatgcgactctcggcgactaaagccttgttggagcgtaaggatgtcgtcttgatt
gcctctgtatcggcaatttacggtctgggcgatcccgattcctacatgaagatgcttttg
catctacgccagggcgataccatggggcagcgggatattcttaagcgcttgagtgagttg
caatatactcgcaacgatctcgagttgcagcgcggtacttttcgcgcccgtggtgaagtt
atcgatattttccccgccgattctgaccgctacgggattcgagtcgagctctttgacgat
gaaattgaacgcttaagcgagtttgacccgttaacggggcaaattgttaagcgtatcgcg
cgcaccacagtgtatccgaaaacccactatgtgacgccacgggaaaaaatcctcgaagcg
accgagttaattaaagaagagctgcgcgagcgtaagcagtatctgctcgacaacaataaa
ttgattgaagcgcagcggatccatgagcgggtgcaatacgatatcgagatgatggtcgag
ctgggctattgctctggaattgaaaactactcccgctatctgtcgggtcgtgcaccgggg
gaaggcccgccgaccttgctcgattatttacccgccgatggattgttgattatcgacgag
tcccacgtcactgtgccgcaaattggcgccatgtataagggtgaccgctcccgtaaaact
acgcttgtggaatatggcttccgtttaccctcggcgctggataaccggccgctgaagttt
gaagagtttgagcaattgatgccgcagaccatttatgtgtcggcaacaccaaacccttac
gaactggataagagtggcggcgagattgttgagcaagtcgttcggccaacgggtttgctc
gatcccgagttagaagtgcgcccggtcagcattcaagtggatgatttactctcagaggtg
gccaaacgcgtcgccgtcaacgagcgggtgcttgtcaccaccctaaccaagcgcatgtcg
gaggatttaactgaatacctcgatgagcatggcgtcaaagtccgttatttgcactcggac
attgataccgtggagcgggtggagatcattcgcgatctgcgcctcggtaagtttgatgtg
ctggtcggtatcaacttgctgcgtgaaggtttagacatgcccgaagtttccttggtctgt
attctcgatgcggataaggaaggctttttacgttcggaacgttcgcttattcagaccatt
ggtcgcgctgcgcgtaacgtcaatggcaaggttatcctctatgcggataggatcacccag
tcgatggccaaggcgatgggtgaaaccgagcgtcgccgcgagaaacaacacgcctacaac
cttgagcatggcatagtgccaaaaggcgtggtcaagcgcattaccgatgtgatggatatc
gacgatggcagagatactgagaagggctacagcccatcgtcactgggtaaagtggctgaa
cctaaagccaaacgttatcaacccgatgcggcgcagcttagccatgatatcgacaagctc
gagaagcaaatgcatgaacatgcgcgtaacttggagtttgaacaggcggcggccttgcgc
gatgaggtgaaacgattacgggagttgctgatcacagcataa
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