Shewanella bicestrii: CF168_11265
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Entry
CF168_11265 CDS
T05197
Name
(GenBank) hypothetical protein
KO
K09800
translocation and assembly module TamB
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbj02000
]
CF168_11265
Transporters [BR:
sbj02000
]
Other transporters
Pores ion channels [TC:
1
]
CF168_11265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ASK69404
UniProt:
A0A220UMD4
LinkDB
All DBs
Position
2580186..2584529
Genome browser
AA seq
1447 aa
AA seq
DB search
MSKPPIHEPNATAQQENQTPEQLSLEQNPTCVQPKTLKLRIWQIFKLCTRIIVYVPLSLL
VLTALLLGTEIGSRITVGLADKFVPDLALTYTSGSLNKDLTLAHASWSMDGIKVELKDLH
LAWQPTCLLQKQLCVNALTASQIDVNIDTEALSSGSTEADVTPENDQPSELVLPFGIKLD
SAELNNINIAVDKMRFSANHIQTAATWFAEGLTVEQLSSEGLAVLIPTDDSPAPDTDPQG
AGTQATGTQATDTQITGTQVTDTKAAETAATAAAKTTTAAATTQPETEKSTTTVATASAK
ASADKPIVEKKPSTETAANPQADKQTDENADKQASTEEWALAHLPQVFMPFPVDVKHLSL
DNSRLQIGPREDLFSHIELQGQFAKYQLTLEKLLLAHSYGEVSVVGQLALEQDYPLALEV
QANVTQVAELPELTHQQLSLTLSQSVGQLGIHALAKGDVDFSLNGQLTLKDPTLPYKVKL
EKVRAQWPLQHAEYLVSDLNLDSQGSLTQQAATLNGNVITPFHKVLAISSELHHQGAKLD
IKQFTAKGELGSVDVTGELDYAKAITWKAKVLLDNLKLQEITLPETAQTPESTPTKDAKA
PSTNTDKPAPAITNAPAPATTTAAATTNAKATTTTSASASASATSSLPNSLISGQLQTTG
RLLDKQWQVALTDTQLSGTMQGYPFDITADVSINDKLYISAKGVNAKVLGSTLTLAGETN
KTWNLEGKLQVPDFGLWLPQASGQLQADINVTGEEKHPQVELTAQLVDLVHQNIKLREST
LKAYYKPLDAHEFALSLKSKALQLGSQSLDTVTLGSKGDIQNQKLTLSATGDLGLELGVT
SQYDMKKSQLQAQVNKINLATPVGRWEIDKDILVGWDQNKSKGNISPFCLVNPNSKVCLD
NQVTIGKTGEAQLSYAGNLGKLLVPVLPNNMQWDGSSSLLANFAWAAGRKPTANVDFNFT
PGSIKLKRAKNREVTINYQQLDFKANLDAKRLLSSISFESEDVASWQSEVTVNVTPDRTL
SGYANIKQINLQPLGEFFPQLNTLEGLLTSRLNFAGTLDAPEVSGNVSLTQGALALTANP
TLINKIDMSMDLGGQQASLKGRWMMGNGLGRVTGDMRWPQGQFSGELAIKGDKLAVIQPP
LTLLDVSPDLTIAFSSQQLEVKGVVDVPSGNIKIVQLAEGGVALSEDVVFDDSIAAAQPK
ASPYAIVADLNINVGNDLKVDGMGLKGKLQGTLKLQQQAFRPPLLFGDIKVKQGSYKFMG
QTLKIRTGEVQFVGPTSVPNLNIEAIREIKSEDLVAGVRVTGTPARPVVTLFSNPAKEQA
EILSYIIKGSGFNSSNNEQNNSLMMGAALGLGSQVGGGGAINNIGSTATGIIEEFGFSNV
QLDTNDEGRVAISGFIGDNLMVKYGVGVFNPGYEMTVRYYLLSQLYLETVSGTLGQSLDI
YYNFNIK
NT seq
4344 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagccccctattcatgagcctaatgcaacggctcaacaagagaatcaaacccct
gaacaattgtctttggaacaaaatccaacgtgtgtgcagcccaaaacacttaagctgcgc
atttggcaaatatttaaactctgcacgcggattattgtttacgttcccttaagtcttttg
gtgttaacggcattactgctcgggactgaaattggctcgcggataacggtgggtttagcc
gataagtttgtgcccgatctggcgctcacctacacctctggctcgttaaataaagatctc
accttagcccacgccagttggtcgatggatgggattaaggtcgagctcaaggatttacat
ttggcatggcaacccacttgtctgctacaaaagcagctgtgcgtgaatgccttaacggcg
agccaaatcgatgtcaatatcgataccgaggccttaagctcaggttccactgaagcagac
gttacccccgaaaatgatcagccgagtgaactggttctgccctttggcataaagctcgac
agcgccgaactgaacaacatcaatattgcggtcgataagatgcgcttttcggcaaatcat
attcagaccgctgcaacttggtttgccgaaggactgacggtcgagcagcttagcagtgaa
ggcttggccgtgttaattccaaccgacgacagtcctgcgccagacacagatcctcaaggc
gcaggcactcaagctacaggtactcaagccactgacactcaaatcacaggcacacaagtc
actgacaccaaggcagccgagacagctgcaactgcagcggcaaaaaccacgaccgcagcg
gcgacaactcagcctgagaccgaaaaatcaacaaccacagtggcgactgcaagtgctaaa
gcttcagcggacaagccaattgtcgaaaagaaaccttctacggaaactgccgcaaatcct
caagcagataaacaaacggatgaaaacgccgataagcaagcatctacagaggaatgggca
cttgcccatttaccacaggtttttatgcctttcccggtggatgtcaagcacctcagttta
gacaacagccgtttacagattggtccgcgcgaagatctatttagtcatattgagcttcaa
ggtcaatttgccaagtatcagttaactctagaaaaactgctgcttgcccatagttatggc
gaagtgtctgtggtgggtcaactcgccctcgaacaggactatccgctcgcgcttgaggtt
caggccaatgtcactcaggttgccgagttgccagaactgacccatcaacaattaagccta
acccttagccaaagcgtcggacaactggggatccacgcccttgccaaaggggatgtggat
tttagtctcaatggacaattgaccctcaaagatcccacgctgccctacaaggtgaaactg
gaaaaagtccgcgcacagtggccgctgcaacatgccgagtatcttgtgagcgacctcaat
ctcgacagccaaggctccctcactcaacaggccgcgacgctcaatggaaatgtcatcaca
cctttccataaagtgttagccattagcagtgagcttcatcatcagggtgcaaagctcgat
attaagcagtttactgcgaagggcgaactaggttcggtcgatgtgactggtgagctagat
tacgctaaggcgatcacttggaaagccaaggtattgctcgataatctgaaattacaggaa
atcacactgccggaaactgcacagactccagaatcaacacctacaaaggacgctaaagca
ccgagcacaaataccgataagccagcgccagcaataacaaatgctcccgctcctgcgaca
acaactgcagctgcaactacaaatgcaaaagcaactacaactacaagtgcaagtgcaagt
gcaagtgcaacgagcagcttgccaaacagtttaatctcgggccaattgcagaccaccggg
cgcctgttagataaacagtggcaagtggctctaacggacacccaactgtcaggcacaatg
cagggttatccgtttgatatcacagccgatgtcagcatcaacgataaactgtatatcagc
gccaaaggtgtcaatgccaaggtattgggttccaccttaaccttagcgggcgaaaccaac
aaaacctggaaccttgagggtaaactgcaagtccccgatttcggtttatggttgccccag
gccagtggtcaattgcaggccgatatcaatgtcactggggaagagaaacatccacaagtc
gagttaaccgcgcaactggtcgatctggtgcatcaaaatattaagctcagggagtcaaca
ctcaaggcttactataagcctttggatgcccatgagtttgccctatcactcaagtcaaag
gcactgcaacttggctcacagagtttagataccgtgaccttgggcagtaaaggcgatatt
caaaaccaaaaattgactctcagcgccacaggggatcttgggctcgagcttggcgtcact
agccaatacgatatgaaaaaatcccaactgcaggcgcaggtgaataaaatcaacttggca
acccccgtcggacgttgggagatagataaggatattcttgtcggctgggatcaaaataag
tccaaaggcaatatcagccccttctgtctagtgaatcccaacagtaaggtttgcctcgat
aatcaagtgactattggcaaaactggcgaggctcagctcagttatgcgggcaatctaggc
aagctattagtgcctgtattacccaacaatatgcagtgggatggcagttcttcactgttg
gcaaattttgcttgggcggcgggacgtaaacccacggccaatgtcgactttaattttact
cccggtagcatcaagcttaaacgagccaaaaaccgtgaagtcaccattaattatcaacaa
cttgatttcaaagctaacttagacgctaaacgactcctctcgtcaattagctttgaatcg
gaagatgtcgccagttggcagagtgaggtcacggtcaacgtaacgccggacagaaccttg
tcgggttacgccaatatcaagcaaattaacctgcaacctttaggtgagtttttcccgcag
ctcaatactctcgaaggcttgctcaccagcagattaaactttgctggcaccttggatgcg
ccagaagtgtcgggcaatgtgtccttaacccaaggcgccctcgcattgacggccaaccct
acgcttatcaataaaatcgacatgtcgatggacttgggcggtcaacaggcatccctcaaa
ggccgctggatgatgggcaatggtttggggcgtgttacgggtgatatgcgctggcctcag
ggccaattcagtggcgagcttgcaattaagggcgacaaattagccgtgatccaaccgcca
cttacgctacttgatgtctcgcccgatctcaccatcgcctttagcagtcaacagctcgaa
gttaaaggggttgtcgatgtgccttcgggtaatatcaagatagtccaactcgctgaaggc
ggtgttgccctgtcggaagatgtggtcttcgatgactcgattgccgcggcgcaacctaaa
gctagcccctatgccattgtggcggatctaaacattaatgtcggtaacgacttaaaagtc
gatggcatgggccttaaaggtaaactgcaaggaaccttaaaactgcagcaacaggcgttc
cgcccaccactgctatttggcgatattaaagtcaaacaaggcagctataagtttatggga
caaaccctgaaaatccgtaccggtgaagtgcagtttgtcggcccgacatccgtgcctaac
ttaaatatcgaagctattcgtgaaattaagagtgaagatctagtcgcgggtgtccgtgtc
acgggcacgcccgcccgcccagtggtaaccctgttctctaaccctgctaaggagcaagca
gagatcctgtcttacattatcaaaggcagcggctttaacagcagcaataacgagcagaac
aattcgttgatgatgggagcggcgctgggcttaggttcacaggtcggcggcggtggcgcc
atcaataacattggcagtaccgccactgggattattgaagagtttggcttctctaacgta
caactggacaccaacgatgagggccgcgtggcgatcagtggctttatcggtgataacctg
atggtgaaatatggtgttggggtatttaacccaggctatgagatgacggtcagatactac
ctgttatcgcaactctatctggaaacggtatcaggtaccttaggccaatccctcgatatc
tattacaacttcaatatcaagtga
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