Shewanella bicestrii: CF168_12880
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Entry
CF168_12880 CDS
T05197
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj03030
DNA replication
sbj03430
Mismatch repair
sbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CF168_12880
03430 Mismatch repair
CF168_12880
03440 Homologous recombination
CF168_12880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbj03032
]
CF168_12880
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_12880
Enzymes [BR:
sbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CF168_12880
DNA replication proteins [BR:
sbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CF168_12880
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CF168_12880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
ASK69679
UniProt:
A0A220UNE5
LinkDB
All DBs
Position
complement(2962256..2962942)
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AA seq
228 aa
AA seq
DB search
MGPWWVNAKLRWRALRCQHQLFKDYYQSLVPLLELPISRAPLMAMDLEMTGLDPLQDQIL
SIGLVPIENGAIPLMGAQQKLVQIQGSVGQSATIHGILDNHLTEAVTIEEAMAWFVAQTR
GHVLVAHHSPLDCRFLQQDILSIYHQAIVLPAIDTLLLEKHRLLREHSVLKEGSLRLGAC
RERYGLPIYGAHSALTDALACGELLLAQVASMGGAEELKVGELLAYSR
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggggccttggtgggtgaacgcaaagctgcgctggcgtgcgttacgctgtcagcatcag
ctatttaaggattattaccaatccttagtgccactgttggagttacccattagtcgggcg
cccttgatggcgatggatttggagatgacaggactcgatcccttacaggaccaaatctta
agtattgggctggtgccgattgaaaatggggcgattcccctgatgggtgcgcaacaaaaa
ctggtgcaaattcaaggcagtgtggggcagagtgcgacaattcatgggatcctggataat
catttaaccgaggcggtaaccattgaagaggcgatggcatggtttgtggcgcaaacccgt
ggtcatgtgttggttgcgcaccattcccccctcgattgccgtttcttacagcaagatatc
ttgtcgatttatcatcaagcgattgtactgcctgcgattgataccttgctgctggaaaaa
caccgcttgctacgtgaacactcagtgcttaaagaaggcagcttaaggcttggtgcatgc
cgtgaacgatatggattaccgatttatggcgcccacagcgccctgactgacgcactggcc
tgcggcgaactgttgttggcacaggtggctagtatgggcggcgctgaggagttaaaggtg
ggtgaattactggcttactcacgctaa
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