Shewanella bicestrii: CF168_13365
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Entry
CF168_13365 CDS
T05197
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbj03016
]
CF168_13365
Enzymes [BR:
sbj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CF168_13365
Transfer RNA biogenesis [BR:
sbj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CF168_13365
Prokaryotic type
CF168_13365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
ArgoL1
Motif
Other DBs
NCBI-ProteinID:
ASK69769
UniProt:
A0A220UNN3
LinkDB
All DBs
Position
complement(3084489..3085274)
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AA seq
261 aa
AA seq
DB search
MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV
VHFETNAIRNEGAWTLGVNANLPDNIAVRWAKEVDDSFHARFSATARRYRYVIYNHNFRP
GILRHGVSHYHGDIDADKMHVAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVKVTRQGMY
VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLALKDRNQAAATAKPNGLYLVD
VTYPEQYQLPKLALGPLFMLD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcggattgcattaggtattgaatatgacggcagtggttatttcggttggcaacgtcag
gccgaagtcgattcagtacaagggcaattagaacaagccttatctaaggtggccaacgaa
cccatcagcttgttctgtgcgggacgaactgatgccggcgttcatgcaacggggcaggtg
gtgcatttcgagacaaatgccatacgtaacgaaggcgcgtggaccttaggggtgaatgcc
aatttgcccgacaatatcgccgttcgttgggcaaaagaggtggatgacagtttccatgcc
cgcttttcagccacggccagacgttatcgctatgtgatttacaatcataattttcgcccc
gggatcctgcgtcacggcgtgagccattaccacggtgatatcgacgccgataaaatgcat
gttgcggcacaggcgctgctcggtgaacaagactttaccagttttcgcgcgattcaatgc
caatcgaaaaccccatttcgcaatgtgcacagcgttaaagtgacccgtcagggcatgtat
gtgattgtcgatatttctgccaacgccttcttgcaccatatggtgcgaaacattgtcggc
tccctgctggaaattggcctaggcaaccaaccattgacttggatggcggatttgctggcg
cttaaagatcgcaatcaagcggcggccaccgccaaacccaatgggctctatttagtcgat
gtgacatatcccgagcagtatcaactgcctaagttggctttagggccattgtttatgctg
gattaa
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