Shewanella bicestrii: CF168_15230
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Entry
CF168_15230 CDS
T05197
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00260
Glycine, serine and threonine metabolism
sbj00460
Cyanoamino acid metabolism
sbj00630
Glyoxylate and dicarboxylate metabolism
sbj00670
One carbon pool by folate
sbj00680
Methane metabolism
sbj01100
Metabolic pathways
sbj01110
Biosynthesis of secondary metabolites
sbj01120
Microbial metabolism in diverse environments
sbj01200
Carbon metabolism
sbj01230
Biosynthesis of amino acids
sbj01240
Biosynthesis of cofactors
sbj04981
Folate transport and metabolism
Module
sbj_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CF168_15230 (glyA)
09102 Energy metabolism
00680 Methane metabolism
CF168_15230 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CF168_15230 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CF168_15230 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CF168_15230 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CF168_15230 (glyA)
Enzymes [BR:
sbj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CF168_15230 (glyA)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
ASK70098
UniProt:
A0A220UPI4
LinkDB
All DBs
Position
complement(3479646..3480899)
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AA seq
417 aa
AA seq
DB search
MLKKDMNIADYDPELFNAIQNETLRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKQLFGATYANVQPHSGSQANSAVYMALLKPGDTVLGMN
LAHGGHLTHGSPVNFSGRLYNIIPYGIDESGKIDYDEMERLAVEHKPKMMIGGFSAYSGI
VDWARMREIADKIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTSTTHKTLAGPRGGIIL
SAADDEELYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKAYQQQVVKNAKAMVE
VFLERGYKIVSGGTDNHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTGWICDILDDAHNPAVIERVKGQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgctgaaaaaagatatgaatatcgcagattatgatccggaactgttcaacgcaattcag
aacgaaactctgcgtcaagaagagcatattgagctgattgcttctgaaaactacaccagt
ccacgcgtgatgcaagcgcaaggttcacaattaaccaacaagtacgccgaaggttatcct
ggcaagcgttactacggtggttgtgagtatgtggacgtagttgaaaccttagcgattgag
cgtgcaaaacaactgtttggtgcgacttacgcaaacgtgcaacctcactcaggttctcaa
gcaaacagcgccgtttacatggcattgttaaaaccaggcgataccgttttaggtatgaac
ctcgctcacggtggtcacttgacccacggttcacctgtaaacttctccggtagactgtac
aacatcattccttacggcatcgatgaatcaggcaaaatcgactacgacgaaatggaacgt
ctggcggttgaacataagcctaagatgatgatcggtggtttctctgcttactcaggcatc
gttgactgggcaagaatgcgcgaaattgcagacaaaatcggtgcttacctgtttgtcgac
atggcgcacgttgcgggtcttatcgccgctggtgtgtatccaaaccccgtgccacacgcg
cacgttgtgacctctactactcacaagaccttagccggtcctcgtggcggtatcattctg
tctgctgccgatgatgaggagctatacaagaagctgaactctgcggtattcccaggcggt
caaggcggtcctttgatgcacgttatcgcgggtaaagcggtagccttcaaagaagcttta
gagccagagttcaaagcttaccaacaacaagtggttaagaatgctaaagccatggttgaa
gtgttcttagagcgcggttacaagatcgtttctggcggtactgacaaccacttaatgctg
gtggacttaatcggtcgcgacctgacgggtaaagaagccgatgccgctttaggtagcgcg
aatatcacagtaaacaaaaactctgtgcctaacgatccacgttcacctttcgtgacctct
ggtgtgcgtatcggtacgcctgcgatcactcgccgtggctttaaagaagctgaagcgaaa
gagttaaccggttggatctgtgacatcctcgacgatgcccacaaccctgcggttatcgag
cgcgtaaaaggccaagtattggcactgtgcgcccgtttccctgtttacggttaa
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