Shewanella bicestrii: CF168_15580
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Entry
CF168_15580 CDS
T05197
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbj03016
]
CF168_15580
Enzymes [BR:
sbj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CF168_15580
Transfer RNA biogenesis [BR:
sbj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CF168_15580
Prokaryotic type
CF168_15580
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
ASK70161
UniProt:
A0A220UQF4
LinkDB
All DBs
Position
complement(3568542..3569480)
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AA seq
312 aa
AA seq
DB search
MARRSKGRFIDGIVLLDKATGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPVCLGE
ATKFSQHLLDSDKRYLVTAKLGQRTDTSDSDGEVVQTRPLEFTEAQLMSALEHFRGDTQQ
VPSMYSALKYQGQPLYKYAREGIEVPREARPITVFELNFIGLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAHYPYDKMVTLEQLEALVAKAQEEQLDPSSLLDSLL
LPMDTAVADFPEVNVPDASAAYLMQGQAVRVSGLVADKLMRITLGTERRFVGIGEMNEDG
LLAPKRLVVLHD
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcgagacgttcgaagggccgctttatcgacggtattgtgttgttggacaaagccact
ggcatgagttccaactttgcattacaacgggtaaagcgcttttttaatgccaataaagcg
ggacacacgggcgcactcgatcccttagcaacgggcatgctacctgtgtgtttaggcgaa
gcgactaagttttcgcagcatttgctggattcggataagcgttatctggttaccgcaaaa
ctggggcaacgcactgataccagcgactctgacggtgaagtggtgcagactcgcccgctc
gaattcactgaggcgcagttaatgtctgccttagagcattttcgtggcgatacccagcaa
gtgccctccatgtattcggcgctgaaataccaaggccagcctttgtataagtatgcccgc
gaggggattgaagtgccgcgtgaggcgcgtccaatcactgtctttgaactgaacttcatc
ggtctagaaggcgatgagctgaccttagacattcattgttctaagggcacttatattcgc
actatcatcgatgatttaggtgagatgctcggttgtggcgcccatgtgattatgctgcgt
cgtactcaagtcgcgcattatccctacgacaaaatggtcaccttggagcaactcgaagcc
ctagttgctaaggcgcaggaagagcagcttgacccaagcagtttgctggactcgttgctg
ctaccaatggatacggcggttgctgactttcccgaggtcaatgtgccagatgcaagcgca
gcttacttaatgcaaggtcaggcggtacgagtctcaggactcgttgcagataaattgatg
cgcattacgttggggaccgagcgtcgtttcgtcggaattggcgagatgaacgaagatggc
ttactggcacctaagcgcttagttgtgctccacgactaa
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