Shewanella bicestrii: CF168_18110
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Entry
CF168_18110 CDS
T05197
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbj03032
]
CF168_18110
03036 Chromosome and associated proteins [BR:
sbj03036
]
CF168_18110
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_18110
DNA replication proteins [BR:
sbj03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CF168_18110
Chromosome and associated proteins [BR:
sbj03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CF168_18110
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CF168_18110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
ASK70625
UniProt:
A0A220UR49
LinkDB
All DBs
Position
4129985..4130257
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIAKIAENADITKAEAARALKSFEAAITESMKNGDKISIVGFGSFETSTRAARTG
RNPQTGKEIQIAEATVPKFKAGKTLRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgaacttattgccaagattgcagaaaatgccgatatcactaaagctgaa
gcagcacgtgcattgaaatctttcgaagcagctattactgaatcaatgaaaaacggtgac
aagatctctatcgttggatttggctcttttgaaacctccactcgcgcagctcgtactggc
cgtaacccacagacaggtaaagaaattcagatcgctgaagccactgtgcctaagtttaaa
gcgggtaaaaccttgcgtgatagtgtgaactaa
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