Shewanella bicestrii: CF168_18890
Help
Entry
CF168_18890 CDS
T05197
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00300
Lysine biosynthesis
sbj00470
D-Amino acid metabolism
sbj01100
Metabolic pathways
sbj01110
Biosynthesis of secondary metabolites
sbj01120
Microbial metabolism in diverse environments
sbj01230
Biosynthesis of amino acids
Module
sbj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CF168_18890
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CF168_18890
Enzymes [BR:
sbj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CF168_18890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Pro_racemase
DHODB_Fe-S_bind
Motif
Other DBs
NCBI-ProteinID:
ASK70771
UniProt:
A0A220US57
LinkDB
All DBs
Position
complement(4315536..4316363)
Genome browser
AA seq
275 aa
AA seq
DB search
MIQFTKMHGLGNDFMVVDGVTQNVFFSPEQIRRLADRNFGVGFDQLLLVEPPYDPDLDFH
YRIFNADGGEVENCGNGARCFARFVRNKGLTNKNKIRVSTSAGKMTLRLERDGTVTVNMG
VPVLDPSQIPFKAKKAEKTYLLQTSQQTFLCGAASMGNPHCVLDVEDVANANVAEIGALL
TKHERFPRRVNVGFMQVVNSGHIKLRVYERGAAETLACGTGACAAVVVGQIQGKLDQQVR
VDLPGGTLTINWEGEGKPLWMTGPAQHVYDGQIQL
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgatccaattcactaagatgcacggactgggcaacgattttatggtggtcgatggtgtc
acgcagaacgtgttcttttcgcctgagcagatccgccgtttagccgaccgtaactttggt
gtcggtttcgatcaacttttactggttgagccgccctatgatcccgatttggattttcac
tatcgtatctttaatgccgacggtggtgaggtcgaaaactgtggcaatggcgcccgttgt
tttgcgcgctttgttcgtaataaagggctgacgaataagaataaaattcgtgtaagtacc
tctgcgggtaagatgactctacgcctcgaacgtgacggcactgtcactgtgaatatgggc
gtgccagtgctcgaccctagccaaattcctttcaaagccaagaaggccgaaaaaacctat
ctgctgcaaacgtcgcagcaaacgtttttatgtggcgcggcgtccatgggcaacccccat
tgcgtgctcgatgtggaagatgttgctaacgctaatgtcgccgagattggtgcactgctc
actaaacatgaacgctttccgcgccgggtaaacgtcggctttatgcaggtagtgaactcg
ggccatatcaagcttagagtttatgaacgcggtgcggccgaaaccttagcctgtggtact
ggggcttgtgccgctgtggtcgtaggacaaatccaaggcaaactcgatcaacaggtacgt
gtcgacttgccgggtggcaccttaaccatcaattgggaaggcgaaggcaaacccctgtgg
atgacggggccggcgcagcacgtttacgatggacaaattcagttatga
DBGET
integrated database retrieval system