Shewanella bicestrii: CF168_18895
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Entry
CF168_18895 CDS
T05197
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj00300
Lysine biosynthesis
sbj00470
D-Amino acid metabolism
sbj01100
Metabolic pathways
sbj01110
Biosynthesis of secondary metabolites
sbj01120
Microbial metabolism in diverse environments
sbj01230
Biosynthesis of amino acids
Module
sbj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CF168_18895 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CF168_18895 (lysA)
Enzymes [BR:
sbj01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
CF168_18895 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
ASK70772
UniProt:
A0A220USB5
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Position
complement(4316434..4317678)
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AA seq
414 aa
AA seq
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MDHFLYQDNTLYAEGCRVNDLAQQYGTPLYIYSRATLERHWHAFNNAVADHPHLVCYAVK
ANSNLAVLNVLARLGSGFDIVSGGELARVIEAGGDPAKVVFSGVGKTVAEMEQALNLGIY
CFNVESSAELEQLNQVAGRLGKVAPVSLRVNPDVDAGTHPYISTGLKENKFGIAMDEAEV
VFARAHALPHLQVKGVDCHIGSQLTEIQPFLDAMDRMLALIDRLSEQGIVIEHFDVGGGL
GVTYDDETPPHPDVYAAALLARLGDRKLKLIFEPGRAIAANAGIFVTQVLYLKENSDKRF
AIVDGAMNDLIRPALYSAWQNIIPVNPRDEQAQVFDIVGPVCETGDFLGKDRQLAIAEGD
LLVVRSSGAYGFAMASNYNTRPRAAEVMVDGDKAYLVREREKLAQLWQGEQLLP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
ttggatcactttctctaccaagacaataccctgtacgccgaaggctgtcgggtcaatgat
ttagcccagcagtatggcacgccactgtatatctattcccgtgcgacgctcgaacgtcac
tggcatgcgtttaacaatgcggtggccgaccatccacatttagtgtgttatgcggtgaaa
gccaactcgaacttagccgtgctaaacgtcttggctcgtttaggcagtggttttgatatt
gtctcgggcggtgagttagcgcgggtgattgaagccggtggcgaccctgccaaagtggta
ttttcgggcgtgggtaaaaccgttgccgaaatggaacaggcacttaacctcggtatttat
tgctttaacgtcgaatcgagcgccgagcttgagcagttaaatcaggttgcaggccgctta
ggtaaagttgcccccgtgtcactgcgggtgaatcccgatgtcgatgctggtacgcatcct
tatatttcaactggccttaaagagaacaaatttggtatcgccatggatgaggccgaagtc
gtatttgcccgtgcccatgcgctgccacatttgcaggtaaaaggggtcgattgccacatt
ggttcacaactgactgagatccaacctttcctcgatgcgatggacagaatgttagccctt
attgaccgtttgtccgagcaaggcattgtgattgaacacttcgatgtgggtggtggttta
ggggtgacctatgatgatgaaactccgccgcatcctgatgtttacgccgccgcactgctc
gcacgtttaggcgatcgcaagctcaagttaattttcgagccgggtcgcgccattgccgct
aacgcggggattttcgtcactcaggtgctgtaccttaaagaaaacagcgataaacgtttt
gcgattgtcgacggcgcgatgaacgacttaattcgtcctgcactctatagcgcttggcaa
aatatcattccggtaaatccaagggatgaacaagcgcaagtatttgatatcgtagggcca
gtgtgtgaaaccggtgactttttaggtaaagacagacaactcgcgattgcggagggggat
ttactggttgtgcgctcgagcggcgcttacggttttgccatggcttccaactataacact
cgtccccgtgcggccgaggtgatggtcgatggtgacaaggcttatctggtgcgtgagcga
gaaaaattagcgcaactctggcaaggtgagcaactcctgccgtaa
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