Shewanella bicestrii: CF168_19595
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Entry
CF168_19595 CDS
T05197
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbj03000
]
CF168_19595
Transcription factors [BR:
sbj03000
]
Prokaryotic type
Helix-turn-helix
Other families
CF168_19595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
AAA_lid_14
HTH_8
HTH_30
AAA_5
AAA_2
Mg_chelatase
PAS_4
AAA_3
HTH_7
nSTAND6
HTH_22
HTH_1
HTH_50
PAS
AAA_7
MutS_III
YgfZ_barrel
HTH_29
Motif
Other DBs
NCBI-ProteinID:
ASK71354
UniProt:
A0A220UT35
LinkDB
All DBs
Position
complement(4478069..4479928)
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AA seq
619 aa
AA seq
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MTVKPHFPTTQAWLTDSWQRSLGAGLSEFRAGEDLRLTRSELKHKHEQYQQLIELVQSHA
LPLFNQLMAHSNSRLLLSDADGYVLKHWGVSRYSSKLADVALDIGVNWLEKYKGTNAIGT
ALTAKQAVSVVGEQHFIRQNRFMSCTACPIFSPQGEMLGVLDITSEQQRHSQQTLMLVSS
LAQQVETALLCHLPDSHYRIDFAAQPSLLNSGWQGIVIASSDGRIVGCNPMAKQLLSQAK
LGDSLEQHLGDNWARAGGFHRDSALHVQTQALALIQTKSTRTLQDKPLNQLGVRFRDPLL
ERAWQQANKVITKQIPLLVLGETGVGKEQFVKKLHAQSARRAQPLVAVNCAALPAELVES
ELFGYQAGAFTGANRTGFIGKIRQAHGGFLFLDEIGEMPLAAQSRLLRVLQEREVVPVGS
NQSFKVDIQIIAATHMDLESLVAQGLFRQDLFYRLNGLQVRLPALRERQDIERIIHKLHR
RHRSSPQTLCTELLVQLMRYDWPGNLRELDNLMQVACLMAEGEAVLEINHLPDYLAQKLM
NLAFEPQTLTEVVDAETTAHPLELSESSSATIDSLHGTINLNVLQAYRACEGNVSQCAKR
LGISRNALYRKLKQLGIKD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaaaaccgcatttcccaaccacacaggcatggttaaccgattcatggcagcgt
agcttaggtgctggcttatcagagtttcgtgctggtgaggatctcagactcacgcgctcg
gagctcaaacataaacatgagcaatatcagcagctcatcgaattagtacaatcccatgcc
ttgccgctgtttaatcaactgatggcgcactccaatagtcgattattgctctccgatgcc
gacggttatgtgctgaaacattggggggtgagccgctattccagcaagctggcggatgtg
gcgctcgatattggggtcaactggctcgaaaagtataagggcaccaatgcaataggcacg
gcgctcacggccaagcaggcggtatcagtggtcggtgagcagcattttatccgccaaaac
cgttttatgagttgcaccgcttgcccgattttttcgccccaaggtgagatgctcggagtg
ctcgatattaccagtgagcagcaacggcattcgcagcaaaccttgatgctagtgtcgagc
ctagcgcagcaggtcgaaacggcgctgttgtgccatctgcccgatagtcattatcgaatt
gattttgcagcgcagccgagtctattaaattctggttggcaaggcatagttatcgccagc
agtgacgggcgaattgtgggctgtaatcccatggcgaaacagctgctgagtcaggccaag
ttgggtgacagtttagagcaacacctcggcgacaattgggcacgagcggggggctttcac
cgcgattcggcgctgcatgtgcagacgcaagcgctggcactgatacagacgaaaagtacc
agaactcttcaagataaacccttgaaccaattgggggtcaggtttcgcgatccactgctt
gagcgggcttggcagcaggcgaataaggtgatcactaagcagatccccctactggtactt
ggcgaaacgggtgtcggcaaggagcaatttgtgaaaaagctccacgctcaaagtgcccgc
cgcgcgcagcccttggtggcggtgaactgcgccgccttgcctgctgagttggttgagtca
gagttatttggttatcaggcgggggcttttaccggtgccaatagaaccggttttatcggt
aagatccgccaagcccacggtggctttttattcctcgatgaaattggtgagatgccgctg
gcggcgcagagccgtttactccgggtgttgcaggagcgcgaggtcgttcccgtcggcagt
aatcaaagttttaaggtcgatattcagatcatcgccgcgacccatatggatttagagtcg
ctggtggcgcagggattgttccgtcaggacttattttatcgcctaaatggattgcaggtg
cggctgcctgcgctacgtgagcggcaggatattgagcgcatcatccataaattgcaccgc
cgtcaccgcagcagcccacaaaccttgtgtactgagttgttggtgcagctaatgcgttac
gattggcccggtaacctaagggagttggataacttaatgcaggtggcgtgtttgatggcc
gaaggtgaggctgtactcgagataaatcatctccccgattaccttgctcaaaagctcatg
aatctggcgtttgagccccaaactttaactgaagttgtcgacgccgaaaccacggcgcat
ccgctcgaactgtccgagtctagctccgccaccatagactcgctccacggaaccataaat
ctgaacgtgttacaggcttaccgcgcctgcgagggcaatgtgagccaatgtgctaagcgt
ttggggattagccgtaatgccttgtatcgcaagttaaaacagctagggattaaggactaa
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