Shewanella bicestrii: CF168_19795
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Entry
CF168_19795 CDS
T05197
Name
(GenBank) LysR family transcriptional regulator
KO
K21698
LysR family transcriptional regulator, transcriptional activator for aaeXAB operon
Organism
sbj
Shewanella bicestrii
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbj03000
]
CF168_19795
Transcription factors [BR:
sbj03000
]
Prokaryotic type
Helix-turn-helix
LysR family
CF168_19795
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
Motif
Other DBs
NCBI-ProteinID:
ASK70934
UniProt:
A0A220URV8
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Position
4524117..4525079
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AA seq
320 aa
AA seq
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MNRNMVKGMIVFAAIAEKGSMSAAATQLNLSSSAVSQQVAKLEMDMGISLFHRNTRHLTL
TEAGTLFYENCIKIIKIVESAEHQLHALKGTPSGELKIAAPVGFGSGLLSQPLAHLLAAH
PQISLNLQLQDGPIDIVNEGIDLAICIGPLSDSNLIARPLADWRMLLCVAPTYIPQHQHL
QHPHELQGFNRISHSYAKPEFLTHSQTQERIELPAQRINVNNMQTLIQLTLDGLGFAVLP
EPEVHQYLASGQLVTLLPDWSLRTYSVYSVTSARDKQPAKVKEAITALSQYFSQMDFSPT
PALLTKPSACEHPPRLAIPA
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaatagaaatatggtcaagggcatgatcgtgtttgccgccatcgcggaaaaaggctcg
atgagtgctgcggcaacacagcttaatctgagttcatcggcggtgagccaacaagtcgca
aagcttgaaatggatatgggaattagtctgtttcaccgtaatacccgccacctgacactc
acagaggcgggcacattattttatgaaaactgcattaaaatcataaaaatagtagaaagt
gccgaacatcagctgcacgcattgaagggcacaccttcgggggagcttaaaatcgccgcc
ccagtcggctttggcagtggtttactcagccagcctttagcccatttattggccgcccat
ccgcagatcagcctcaatctgcaattacaggacggtccaatcgatatagttaacgaagga
atagatctggcgatttgcatcggccctctatcggattcgaaccttatcgctcgccccttg
gcagattggcgcatgttgttgtgcgtcgcacccacctatattccccagcatcaacaccta
cagcatcctcacgagttacaaggattcaaccgtattagccacagttatgccaagcccgag
ttcttaacccattcacagactcaagagcgaatagaactccctgcccagcgcatcaacgtc
aacaatatgcagacgcttatccaactcaccctcgatggattaggctttgccgtattgcca
gagccagaagtgcatcaatatcttgcatcggggcagctggtaacacttttgcccgactgg
tcgctacgcacctacagtgtttacagcgtgacctcggcgcgggataaacagcccgccaaa
gtgaaagaagccatcactgcgctcagccaatattttagccagatggattttagcccgacc
ccagcattactgactaaacccagcgcctgcgagcacccgccaagattagccatacccgcc
taa
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