Shewanella bicestrii: CF168_20730
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Entry
CF168_20730 CDS
T05197
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj03030
DNA replication
sbj03410
Base excision repair
sbj03420
Nucleotide excision repair
sbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CF168_20730
03410 Base excision repair
CF168_20730
03420 Nucleotide excision repair
CF168_20730
03440 Homologous recombination
CF168_20730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbj03032
]
CF168_20730
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_20730
Enzymes [BR:
sbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CF168_20730
DNA replication proteins [BR:
sbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CF168_20730
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CF168_20730
NER (nucleotide excision repair)
GGR (global genome repair) factors
CF168_20730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASK71110
UniProt:
A0A220USZ0
LinkDB
All DBs
Position
4739892..4742660
Genome browser
AA seq
922 aa
AA seq
DB search
MPTIANNPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLSRYQPSHIAV
VFDAKGKTFRNDLYEEYKAHRPPMPDDLRSQIEPLHRIIRALGLPLISIPGVEADDVIGT
IARQASRENRAVLISTGDKDMAQLVDENITLINTMTDTIMGPEEVAAKYGVGPDRIIDFL
ALMGDKADNIPGLPGVGEKTALAMLTGAGSVANLLAEPEKVTELGFRGAKTMAAKIIDNA
DMLKLSYELATIKTDVELEQDWHELEAKPADRDELIKCYGEMEFKRWLAEVLDNKAPTTV
AAKVETTETQEESTPSVTIETQYDTILTEAQLDEWIAKLKQAPLMAVDTETTSLDYMVAE
LVGLSFAVEAGKAAYLPLAHDYVGAPQQLDKQTALEKLRPILEDAKLKKVGQNLKYDISV
LANAGIQLQGVVFDTMLESYVFNSVASRHDMDGLALKYLGHKNIAFEDIAGKGAKQLTFN
QIPLETAAPYAAEDADITLRLHQHLWPRLEKETELASVFTDIELPLIQILSDIERQGVFI
DSMLLGQQSDELARKIDELETKAYDIAGEKFNLSSPKQLQVLFFEKLGYPVIKKTPKGAP
STAEEVLVELALDFPLPKVILEHRSLTKLKSTYTDKLPLMVNAKTGRVHTSYHQANAATG
RLSSSEPNLQNIPIRTEEGRRIRQAFIAPQGRKILAADYSQIELRIMAHLSQDAGLLKAF
AEGKDIHRATAAEVFGTDFDSVTSEQRRRAKAVNFGLIYGMSAFGLARQLDIPRNEAQTY
IDTYFARYPGVLRYMEETRASAAELGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAP
MQGTAADIIKKAMISIADWIKTDTQGEIAMIMQVHDELVFEVDADKAETLKLKVCELMAK
AANLDVELLAEAGIGDNWDQAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgcctaccatagccaataacccacttgtccttgtggatggatcttcttatttatatcgc
gcctattatgcgcctcctcacctgacaaactcaaagggcgaagctactggtgctgtttat
ggcgtagtgaatatgctccgcagtttattaagccgttatcaacctagccatatcgctgtg
gtgttcgacgctaaaggcaaaaccttccgcaatgacttatatgaagaatacaaggcacat
cgcccgcctatgccggatgacctgcgctcacaaattgaaccactacaccgtattatccgt
gccttaggcctgcccttaatctctattcctggtgttgaggcggacgatgttatcggcaca
atcgctcgccaagcgagccgcgaaaaccgcgctgtactcatcagcactggtgataaagac
atggcgcagctggttgatgaaaatatcacgctgatcaacaccatgacagataccatcatg
ggtcctgaagaggttgcggctaaatatggtgttggcccagacagaattatcgatttcttg
gcgttgatgggcgacaaggcagataacattcccggtttacccggcgtaggcgaaaaaacc
gcattagctatgctcacaggggcgggtagtgtcgccaatttgcttgcagagcccgaaaaa
gtcaccgaattaggctttaggggcgcaaaaaccatggcggcgaaaataatcgacaatgcc
gacatgctaaaactgtcctatgagcttgctaccattaaaaccgatgtcgagctcgaacaa
gattggcatgaactcgaagccaaacccgctgacagggatgagctgatcaaatgctatggc
gaaatggaatttaagcgctggcttgccgaagtcttagacaataaggcgccgacgacggtc
gcagcaaaagtcgaaacgaccgaaacccaagaagaatcaacgcccagcgtcacgattgaa
actcaatacgatacgattctgaccgaagctcagctcgatgagtggattgccaaactcaag
caagcgccattaatggccgtagataccgagaccaccagcctcgactatatggttgcggaa
ttggttggcctgtcctttgctgttgaagcgggtaaagccgcctacctgcccttagcccac
gattatgttggcgcgcctcaacaattagacaagcaaaccgctctcgaaaaactgcgcccg
atactcgaagacgccaagctcaaaaaagtcggtcaaaacctgaaatatgacatcagcgta
ttggccaatgcaggcatacaactccaaggagtggtattcgacactatgctcgaatcctat
gtgtttaactcggtcgcctcacgccatgatatggatgggttggcgcttaaatacctaggc
cataaaaatatcgcctttgaagatatcgcgggtaaaggtgctaaacagctgacctttaac
caaattccgttggaaacagcagcgccctatgcagcggaagatgccgatattaccctacgt
ctacatcaacatttgtggccaagactcgaaaaagagaccgaattagcctcggtctttacc
gatattgaactgccgctgatccaaatactgtccgatattgaacgccaaggtgtgtttatc
gatagcatgttgctcggccaacaaagtgatgagcttgcccgcaaaatcgatgagttagaa
acaaaagcttatgatattgcaggtgaaaaattcaatttaagctcaccaaaacaactacaa
gtgctgttttttgaaaagctgggttatccggtcatcaaaaaaacccctaagggcgccccc
tctaccgcggaagaagtactggttgagttggcattggatttccctctgcctaaagtgatc
cttgagcatagaagcctaaccaagctaaagagtacttacaccgacaagctccctctaatg
gtgaacgcgaaaacgggtcgggtacacacaagctaccatcaggccaacgccgcaacgggg
cgtttgtcctcgagcgaacccaacctacagaatattcctatccgcaccgaggaaggtcgt
cgtattcgccaagcctttattgcgcctcaaggacgtaagattttggccgccgactattcg
cagattgaattacgcatcatggcgcatttatcccaagatgcgggcttactcaaagccttc
gctgaaggtaaagacattcacagagccaccgccgccgaagtatttggcaccgactttgac
agcgtcacctcggagcagcgtcgccgcgccaaagccgttaactttggccttatctatggc
atgtccgcctttggattggcgcgtcagctcgacattccccgcaacgaggcacaaacttac
atcgacacttacttcgctcgctatccaggcgtattaaggtatatggaagaaacacgagcc
agtgcagcagaacttggctatgtctctacgttatttgggcgccgcctgtatttacccgaa
attcgcgaccgcaatgcaatgcgccgccaagcagcagaaagagccgcgattaacgcccca
atgcaaggcaccgccgcggatatcattaaaaaagccatgatcagcattgccgattggata
aaaaccgatacccaaggtgaaatcgccatgatcatgcaagtccacgacgaattagtattc
gaagtcgatgccgataaagccgaaacactcaagctcaaggtgtgtgaacttatggcaaaa
gcagccaatctggatgtggaacttctggcagaagctggtattggcgataactgggaccaa
gcccactag
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