Shewanella benthica: SHEWBE_0119
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Entry
SHEWBE_0119 CDS
T06707
Symbol
nemR
Name
(GenBank) HTH-type transcriptional repressor NemR
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbk03000
]
SHEWBE_0119 (nemR)
Transcription factors [BR:
sbk03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SHEWBE_0119 (nemR)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_13_2
Motif
Other DBs
NCBI-ProteinID:
SQH74120
UniProt:
A0A330LYY4
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All DBs
Position
SHEWBE:complement(111531..112148)
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AA seq
205 aa
AA seq
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MKTESPTQSTRQHILDVGYKLIVAKGFSCVGLSQLLQAAEVPKGSFYHYFKSKEQFGEAL
IQGYFEGYKAELNSLFGNTSLSGYERLMTYWQRWQTAQTQGCIDQKCLVVKLSAEVADLS
EAMRLALLKGSADVIQRLTDCITAGIEDCSIAERDPQSTAEMLYHMWLGASLMNKLGHSS
DALDRAIQTTQSVLQPKPTAYLVKK
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaatcaccgacacaatccactcgtcaacatatcctcgacgtaggctataag
ctgatcgtcgccaagggtttttcctgtgtgggactatcgcaactactgcaagcggcagaa
gtgccaaaaggctccttctaccactatttcaaatcgaaagagcaatttggtgaagcgctt
attcaaggttacttcgaaggttataaagctgagctcaatagcctatttggtaatactagc
ctgagtggttatgagcgcctgatgacgtattggcagagatggcagactgcacagacccaa
ggctgcatcgatcagaagtgtctggtagtcaagctcagcgctgaggtggccgacttgtct
gaggcgatgcgcttggcactactcaaaggctctgcagatgtgattcagcgcctgactgat
tgcattactgccggtatcgaagattgctccatcgcggagcgagatccacaatctacagcc
gaaatgctgtatcacatgtggttaggtgccagtttgatgaacaagttgggtcatagctct
gatgccctcgatagggccatacaaacgactcaatcagtcctgcagccaaaaccgacggct
tacttggtaaaaaaataa
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