Shewanella benthica: SHEWBE_0173
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Entry
SHEWBE_0173 CDS
T06707
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
sbk
Shewanella benthica
Pathway
sbk00470
D-Amino acid metabolism
sbk00550
Peptidoglycan biosynthesis
sbk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SHEWBE_0173 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SHEWBE_0173 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbk01011
]
SHEWBE_0173 (murD)
Enzymes [BR:
sbk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
SHEWBE_0173 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
sbk01011
]
Precursor biosynthesis
Amino acid ligase
SHEWBE_0173 (murD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Shikimate_DH
KR
Glyco_hydro_3
Motif
Other DBs
NCBI-ProteinID:
SQH74169
UniProt:
A0A330LV92
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Position
SHEWBE:complement(161853..163202)
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AA seq
449 aa
AA seq
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MELHNSHLVLGLGATGLSVVRYLCRQGITPLVMDSREQPPGAKQLALEFPEVNLITGGFD
CRYLVQASQIVISPGIALDTPEIRAAIDMDIEVIGDVELFARAVKDSSPCVIGITGSNGK
STVTTLVGEMAKAAGLNYAVGGNIGIPVLDLLQSPIDLYILELSSFQLETTHSLNCIAAT
CLNISEDHMDRYRDLEAYRQAKLSLYDQSKRALFNREDSLTQPNDPMDQNSFGLTSPVND
EWGVKDGKIVHGASEIVSLDDVAIVGSHNHANLIAAMALAYHAGIEKKSMIEVAKHFTGL
AHRCELVANIDAVSYVNDSKATNVGATVAALEGLSEHLGDIILIAGGDGKGADFSPLEAV
LDKVTHLITLGKDGDKIAALKDNSKRVDSMADAVKQAAGLATAGDIVLLSPACASLDMYK
NFMARGDDFRQLVQALNAENLDSEAGTDV
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcacaattcgcacttagttttaggattgggagccaccggactctcggttgtg
cgctatttgtgtcggcagggcatcacacctctagtcatggacagtcgtgagcaacctcca
ggggctaagcagctagcgctcgaatttcctgaggtgaacttaattaccggcggcttcgat
tgccgctatctggtgcaggccagtcaaatagtgattagtcccggcatagcgttggataca
cctgagatccgtgcagcaatagacatggatatcgaagttatcggcgatgtcgagttgttc
gcaagagcagttaaagatagcagcccatgtgtcatagggatcacaggatcgaatggtaag
tcaacggtcaccacattagtgggcgagatggccaaagccgctggccttaattatgctgtg
ggtggcaacataggcatcccggtgctggacttactacagagtccaatcgatctttatata
ctcgagctgtccagttttcaactcgagaccactcatagtctgaattgcattgcggcgact
tgcttaaatatcagtgaagatcatatggatcgttatagagatctagaggcttacaggcaa
gctaagttgtccctttacgatcagagtaagagggccttgtttaatcgtgaagattccctg
actcaacccaatgacccaatggaccaaaacagcttcggtttaacctcgccagtaaatgat
gaatggggtgtcaaggatggcaagatagtccatggggcaagcgagattgtctcgttagat
gatgttgcgattgtcggtagtcataatcatgccaatttaatcgccgccatggccctggct
tatcatgccggtatagaaaaaaaatccatgattgaagtggctaagcattttactggcttg
gctcaccgatgtgagttagtggcaaatatagacgcagtctcttatgtcaacgactcaaag
gcgacgaatgtcggtgctacggtagccgcgttggagggcttgagtgagcatttaggtgac
atcattctgattgctggcggcgatggcaaaggggccgattttagcccattggaagccgta
ttagataaggttactcatctcattaccttgggtaaagatggcgataaaattgcggcatta
aaagataactccaagcgagtcgactcaatggccgatgccgtcaagcaagctgctggtttg
gcaacggctggcgacattgtcttattgtctccggcttgtgcgagcctggatatgtataag
aattttatggctaggggcgatgattttcgtcaactggtacaggcgttaaacgccgaaaac
ttagattctgaggctggtacggatgtctag
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