Shewanella benthica: SHEWBE_0408
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Entry
SHEWBE_0408 CDS
T06707
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_0408
Transporters [BR:
sbk02000
]
Other transporters
Pores ion channels [TC:
1
]
SHEWBE_0408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
SQH74397
UniProt:
A0A330M3Y1
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All DBs
Position
SHEWBE:365658..367814
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AA seq
718 aa
AA seq
DB search
MKFATSLIALSIASAITPNLVTAEEADIEVITVTSSRMGKPVSAIPNTVTIIDREQLEQQ
FRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLRSGGRSGQTI
DPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGNNEHQVSFDVTVPNSLESDGISFG
TSYSFSGESDQLDMIGSVSYRNNGVYYDANDQMVGVDTTQGESMDSQSADFFIKLGHNFD
ESRLELMVNHYNMENNGDYMPVKGDKENDIPTGALKQEQPWEAANNQVTTISLTYTHADI
AGQQLHLQFFNQNFEAVYGGGCWSSFYDPSMEGSDQVTVCGTGANGESLYYEQSRNKSVK
WGMKASMIANNIADSGINLAYGLDIFRDTTEQDMLVSGVSWVPESTYENIAPFAQLDYDL
IENLTLSGGVRYEYAKLKVDDYKTMYGYGDKEIEGGSPDFNETLFNIGASYQITPSIRLY
TSFNQGFGMPDIGRVLRDGDSFPDENPSIDDSLVITPIVTDNIEFGADYQGEYFIAKIAF
YRSSTDYGSRMVEKDDGSGSFVVKREKSVIQGIESNITAYIGDNDDVGVNIAIQNGEYDS
NDDQSVDTDLDGANISPNRINLFWTHNFDNDISTRIQANFFMDKDFKDASDEIYSSFDGY
TSVDASVAIPVYKGTLSIGIQNLLNEDYYTYYSQTVGKDTRYFKGMGRTATIGFTMPF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgcaacatcattaatagcgctatctattgccagcgcaataacacctaatctt
gtcacggcagaagaagccgatattgaagtcattacagtgacttccagccgtatgggcaag
ccagtcagcgccattcccaacacggtcaccattatcgacagagagcagctggagcagcag
ttcagaaccactaaagatctatcgacaattatcggtaacttggcacctagcttctctccc
agtcgtcagaaaatgagtaatacaggtgaaacactgaggggccgtccaccactgatcatg
atagatggagtgcctcaatctaaccccctacgcagtggtggtcgttcgggccagactatc
gatcccgcgatgatcgaacgtatcgaaattattcacggcgccaatgccatgcatggcctg
ggtgcacagggcggcatcatcaattatataaccaagaagcctaccggcaataatgagcat
caagtgagtttcgatgtcacagtgccaaatagcttagagtccgatggcatcagcttcggc
accagttattccttctccggtgagtcagaccagttggatatgataggttctgtcagctac
cgcaacaatggcgtctattacgatgcgaacgatcagatggtcggcgtcgacaccactcaa
ggcgagtccatggacagtcagagtgctgacttcttcatcaagctaggacataacttcgat
gagtcacgcctggagctgatggttaatcactataatatggaaaacaacggcgactatatg
cccgttaaaggtgacaaagaaaacgatattccaacgggtgccctcaagcaagaacaacca
tgggaagcagccaacaatcaagtgaccactattagcctgacctatacccatgcagatatt
gccggccagcagctgcacctgcaatttttcaatcaaaacttcgaagccgtatacggtggt
ggttgttggtctagtttttacgacccaagcatggaaggcagcgatcaagtcaccgtctgc
ggcaccggcgctaatggtgaatctctctattatgagcagtcgcgcaacaagtcagttaag
tggggcatgaaagcctctatgatcgccaacaatatcgccgattcaggtattaacctcgcc
tatggtttagatattttcagggataccacagagcaggacatgctggttagcggggtatct
tgggtacctgaaagcacctacgagaatatcgctccctttgctcagcttgattatgacctt
atcgaaaacttgaccctatccggcggggtgcgttacgaatatgccaaactcaaggtcgac
gactataagaccatgtacggctatggcgacaaggagatcgagggaggttcaccagatttc
aatgagaccctgtttaatatcggcgcttcataccagataacgccatcgattcgactctac
accagcttcaaccaaggattcggcatgccggatatcggccgcgtcctacgtgatggcgat
agcttcccggatgaaaacccgagtatcgatgactcactcgtcataacaccaatagtcacc
gacaacatagagtttggtgcagactatcagggagagtatttcatcgccaagatcgccttc
tatcgctcatcgaccgactacggcagtcgtatggtagagaaggatgatggcagtggctca
ttcgtggttaaacgcgagaagagtgttatccaaggcatagaatctaatatcaccgcctat
atcggtgacaatgatgatgtcggcgttaatatcgcgattcaaaatggcgagtatgattca
aacgacgatcagagtgtcgataccgacctagacggcgcgaatatctcacctaatcgtatc
aacttgttctggactcataacttcgacaacgatatctcgactcggattcaggcgaatttc
tttatggacaaagacttcaaagatgccagtgatgagatctattcgagcttcgatggctac
actagcgtggatgcatctgttgcgattcctgtgtacaagggcaccctgagcataggcatt
caaaacctgttaaatgaagattactacacttactattctcagacagtaggtaaagacacc
cgctactttaaggggatgggccgcacagccacaatcggtttcaccatgccattctag
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