Shewanella benthica: SHEWBE_0568
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Entry
SHEWBE_0568 CDS
T06707
Name
(GenBank) conserved protein of unknown function
Organism
sbk
Shewanella benthica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
DEAD
DUF3848
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
SQH74553
UniProt:
A0A330LZM6
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All DBs
Position
SHEWBE:complement(516724..519738)
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AA seq
1004 aa
AA seq
DB search
MQLIHLFWQPDNSAFNNTGQMYLWVESQNEITSPGFYPYQLDSSSFMGFSTTQLKMNSAF
DEVDIWLPCNAKGEATASPVIANINNLDDNQCTTFKPFILNVIEVDDPIGFLKELNFQSY
HFEETLILADDAKFWIKMAYELSHMIKQDQYIPALVAQKGTAKTQYHTKWQTLSSEYHHR
LKMISSHMPHSACLGDFTGYDTLSALHHFSDVSLNQLIAATPYSQKNIKSVEGTFIAQTL
SHQTQNIDANTFKAWKLWQNNLVYDQFGADFTLCFKLLEASDQHEGDWGLELLLQSKRDP
SFMVNLTQYRQDKAAKQQLFAELLGTSVERTLLLQLGYASRIYAVIEHIFTTKMREAVIP
LDQQQAFQFLKEDAWTLHACGYRIIVPAWWTSKGRLKAKVKLRAHRSTTSASNSPSGFID
TDSLIQFDYSYSMGEHEVSAEQWQQLLETKSDLVYFRGSWIEIDKAEMEKIQGLIETSRK
DMDSGNMQNLLALAADESSYDIELDAGLETIVDELKNKHKFSLITQPAQLQAKLRPYQNR
GTSWLAYLETLGMNPCLADDMGLGKTMQIIALMLLQPRKQAALLVAPTSVVGNWLKEIQK
FAPTLNAVIHHGSQRKQKQAFSKLVAQHDLVITSYGLIRKDKALFKEIRWSRLIIDEAQN
IKNPASAQTKILYGLSADSRIALTGTPIENRLMDLWSIFNFLNPGLLGTQASFRKNFELP
VQRDNNLHKGQLLKNIVEPFILRRLKTDKNIINDLPDKIEQKVYCELTTEQASIYQSIVD
EITAQMEQTEESQGQKVIMLSALLRLKQCCNHPAQVLQDGSEFSIERSIKLQRLVETSKE
AIGNNESILIFSQFTEVCSQIQKIFKNQLGYQTYYLHGATSRTRREQMIQQFQAEDSPPA
VFILSLKAGGVGITLTKANHVIHFDRWWNPAVEDQATDRAYRIGQQKTVFAHKLITLGTI
EEKIDKMLEDKKKIADSIIGNDESWLSGLDANSFIKLIQLSREV
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttatccatctattctggcaacctgataattctgcattcaacaacacgggtcaa
atgtatttatgggtggagagtcagaatgagataaccagccccgggttttacccttaccag
ctagacagcagtagcttcatggggttttccaccacacagctgaagatgaactcggccttc
gatgaagtagacatctggctcccttgtaacgccaagggtgaagctacagcctcgccagtc
atcgccaacatcaataatttagacgacaatcagtgcactacatttaagccattcatactc
aatgtgatagaggtggatgatcccatcggctttttaaaagagctaaactttcagagttat
cacttcgaagagacgctgatcttagccgacgatgccaaattttggatcaagatggcctat
gagctcagccatatgatcaagcaagatcaatatatccccgccctggtagcgcagaaaggg
acagcaaaaacccagtaccatactaagtggcagactctctcatccgaatatcaccaccgg
ctgaagatgatatcctcccacatgcctcattcggcctgcttaggtgattttaccggctac
gacaccctgtcggccttacaccacttctccgatgtcagcctcaatcaattgattgcagcc
acgccttacagccagaaaaacatcaagtcagtagaaggtacttttatcgcacagaccttg
agtcaccaaactcaaaacatagatgcaaacacattcaaggcatggaaactgtggcagaat
aatctagtctatgatcagtttggcgccgatttcaccctgtgctttaaactgctcgaagcc
agtgaccagcatgagggcgactggggactcgagctactgctgcagtcgaagcgggatcca
tctttcatggtcaacctgactcagtaccggcaggataaggccgctaaacaacagcttttc
gccgaacttctgggtacctcggtggagcgcacactcttgctgcagctaggctatgccagt
cgaatctatgccgtcatcgaacatatttttacaactaagatgcgggaggccgtgatcccg
ctcgatcagcagcaggcttttcaatttctgaaagaggatgcctggaccctgcacgcctgc
ggctaccgcatcatagtcccggcatggtggacttctaagggccggcttaaggctaaagta
aaactcagggctcacagaagcacgactagcgcctctaattcacccagcggctttatcgac
acagatagtcttattcagttcgactatagctattccatgggtgaacacgaggtgagcgca
gagcagtggcagcagctgctggagactaaatctgatctggtttatttcagaggcagctgg
atagagatagataaagccgagatggagaagatccaagggcttatcgaaacctcccgcaaa
gacatggacagcggcaacatgcaaaatctcttggccctggcagcagatgaatccagctac
gatattgagctggatgcaggcttagagactatagtcgatgagctaaaaaataaacataaa
tttagcctaatcacccagcctgctcagttgcaagccaagcttaggccctatcaaaatcgc
ggcacatcctggctggcctacctagaaaccttgggcatgaacccctgcctagccgacgac
atgggtctgggtaagaccatgcagatcatagcactcatgctgttacaaccgagaaaacag
gcggccttgctggtggcaccgacctctgtggtgggtaattggctaaaagaaattcaaaaa
tttgccccaacgttaaatgctgtcatacatcacggcagtcagcgcaaacaaaaacaggcg
ttcagcaaattagtcgcgcagcacgatctggtcatcacctcctatggcctgatccgcaag
gataaggccctgtttaaagagatacgctggtcacggctgatcatcgacgaggcgcaaaat
attaagaacccggcatcggcacagaccaagatactgtacggcctcagtgcagactcgcgc
atcgccctcactggcacaccgatagaaaaccgcttaatggatctctggtctatctttaac
ttcttaaaccccggtctactaggcactcaggccagcttcaggaaaaacttcgaactaccg
gtgcagagagacaataatttacataagggtcagttactgaagaatatcgtcgagcctttc
atcctgcgccgactgaagacagataagaatatcatcaacgatctaccggacaagatagaa
cagaaagtctattgtgaattgactaccgagcaggccagcatctatcaatccatcgtcgat
gagatcaccgcacagatggagcagacagaggaaagccagggccagaaagtgatcatgtta
tccgccctactgaggctgaagcagtgctgcaaccacccggctcaggttctgcaggacggc
agtgagttcagcatagagcgttcgatcaagttgcagcgtctggtggagaccagcaaggaa
gccatcggcaataacgagagtatcctcatcttcagtcaattcaccgaagtctgtagccag
atacaaaaaatatttaaaaatcagctgggttaccaaacctattatctgcatggagcgacc
tcacgcacccgacgtgagcagatgatccagcagtttcaggccgaagatagccctcctgcg
gtattcatcttatcgctaaaagccggtggtgtaggtatcaccctcaccaaggccaaccat
gttattcacttcgaccgttggtggaacccggccgtggaagatcaggccaccgacagggcc
tatcgcatcgggcagcagaaaaccgtgtttgcacataaattaatcaccttaggcaccata
gaagagaaaatagataagatgttggaggataagaaaaaaatagccgactcgattatcggc
aatgatgagtcctggttatccggactcgatgccaattcattcatcaagctaatccagctg
agccgggaggtctga
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