Shewanella benthica: SHEWBE_0597
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Entry
SHEWBE_0597 CDS
T06707
Symbol
fadB
Name
(GenBank) fused 3-hydroxybutyryl-CoA epimerase and delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase and enoyl-CoA hydratase; 3-hydroxyacyl-CoA dehydrogenase
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sbk
Shewanella benthica
Pathway
sbk00071
Fatty acid degradation
sbk00280
Valine, leucine and isoleucine degradation
sbk00310
Lysine degradation
sbk00362
Benzoate degradation
sbk00380
Tryptophan metabolism
sbk00410
beta-Alanine metabolism
sbk00640
Propanoate metabolism
sbk00650
Butanoate metabolism
sbk00907
Pinene, camphor and geraniol degradation
sbk00930
Caprolactam degradation
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
sbk01200
Carbon metabolism
sbk01212
Fatty acid metabolism
Module
sbk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SHEWBE_0597 (fadB)
00650 Butanoate metabolism
SHEWBE_0597 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SHEWBE_0597 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SHEWBE_0597 (fadB)
00310 Lysine degradation
SHEWBE_0597 (fadB)
00380 Tryptophan metabolism
SHEWBE_0597 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SHEWBE_0597 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SHEWBE_0597 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SHEWBE_0597 (fadB)
00930 Caprolactam degradation
SHEWBE_0597 (fadB)
Enzymes [BR:
sbk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SHEWBE_0597 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SHEWBE_0597 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SHEWBE_0597 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
SHEWBE_0597 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
SQH74582
UniProt:
A0A330LX39
LinkDB
All DBs
Position
SHEWBE:complement(552809..554962)
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AA seq
717 aa
AA seq
DB search
MIYQSPTIQVELLEDNIARLCFNAPGSVNKLDRETIDSLNAALDAIKKNSDIQALVLTSA
KSAFIVGADITEFLGLFAQDDSVLLPWIAEANVVFNKLEDLPFPTISAINGFALGGGFET
VLATDFRIADTTARVGLPESKLGLVPGFGGTVRLPRIIGADNALEWITSGKDQRPEAALK
VGAIDAIVAPENLQAAAIQMIKDAVAEKLDWQSRRARKQAPLTLPKLEAMMSFATAKGMV
FKIAGKHYPAPMTAISVIEQAANLKRDEALKIEHQAFVKLAKTEVAQALIGIFLNDQLVK
GKAKKAGKLAKKVDTAAVLGAGIMGGGIAYQSASKGTPIVMKDITQPALELGLGEASKLL
AAQIKRGRSTPEKMAKVLNNITATLDYTPVKDVDLVVEAVVEHPKVKAMVLAEVEQHVAD
DAIITSNTSTISINLLAKALKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFINRVLFPYFAGFSGLLADGGDFAAIDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMAKEGKDAIDIMFEAQRFGQKNSKGFYAYSVDRRGKP
KKDVDAISYELLGAEFGELKQFESDEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVY
GLGFPPFRGGVFRYIDTMGVANFVALADKYAHLGGLYQVTDAMRELAANNGSYYQSK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagtcctacgattcaggttgagttacttgaagataatatcgctcggcta
tgctttaacgcaccgggttcagtcaacaagctagatagagaaacgattgactctcttaac
gctgcactcgatgcaatcaagaaaaattcagacatccaagctttagtcctgacttcagct
aaaagcgccttcatcgttggcgccgacatcactgaattcttaggcttgttcgctcaagac
gatagcgtgctactcccttggatagcagaagcgaatgtcgtatttaataagttagaagat
cttccctttccaactatctcagccatcaacggcttcgcactaggtggcggtttcgaaacc
gtactagcaaccgatttccgtattgccgatacgacggcaagagtgggattacccgagtct
aagctaggactggttcctggttttggtggtacggttcgcctgccacgtataatcggtgca
gacaacgccctcgagtggatcactagcggtaaagaccaacgtccggaagcggcacttaaa
gtcggcgccatcgacgcgatcgttgcaccagagaatttacaagctgcagcgattcagatg
atcaaggatgccgtcgcagaaaaactcgattggcagagtcgccgcgctcgcaagcaggca
ccactaacactgcctaagctagaagctatgatgtcattcgccacggcgaaaggcatggtc
ttcaagatagcaggcaagcattatccagcacctatgacagccatcagcgtcatagagcaa
gccgcaaaccttaagcgagatgaagcccttaagatagaacatcaagcttttgttaagcta
gccaaaacagaagtggctcaggcattgatcggtatcttcctcaatgaccagttagtcaaa
ggcaaggcgaaaaaggccggtaaactggcgaagaaagtagacacagccgccgtactgggt
gcaggcatcatgggtggcggcatcgcctaccagagcgccagcaagggcactcctatcgtc
atgaaagatatcacacagccagctctggagttaggcctgggtgaagcgtctaagctgctt
gcagcgcagattaaacgtggtcgttccacaccagagaagatggccaaggtgcttaacaac
atcactgcgactctggactataccccggttaaagatgtcgacctagtcgtcgaagccgtt
gtcgaacatcctaaggtcaaggctatggtactggccgaagttgagcagcacgttgccgac
gacgccatcatcacctcgaatacatctaccatctcgattaacctactggctaaggccctg
aagaagcctgagcgtttctgtggcatgcacttcttcaacccggtacataagatgccattg
gttgaaattattcgtggtgagcatagctcggaagagacaattgcgactgtcgttgcttac
gctagcaagatgggtaagacacctatcgtagtcaatgattgtccaggtttcttcattaac
cgtgtgctgttcccttacttcgccggcttcagtggcctactcgccgatggcggtgatttc
gccgcgatcgataaggtgatggagaagcagttcggttggccaatggggccagcatacctg
ctcgatgttgtcggtttagatacgggtcatcacgcacaggctgtaatggctgaaggcttc
cctgatcgcatggcgaaagaaggcaaagatgctatcgatatcatgttcgaggcacaacgc
ttcggtcagaagaatagcaaaggtttctatgcttactcagtcgaccgtcgtggcaagccg
aaaaaagatgtcgatgccattagctatgaactgctaggtgccgaattcggcgagcttaag
caattcgagtccgatgagatcatcgcccgcactatgatcccgatgatcatagaaactgtg
cgttgtctcgaggaaggcattatagcttcacctgctgaagcggatatgggtctggtttac
ggtctaggtttcccgccattccgcggcggtgtattccgttacatagataccatgggcgtg
gcaaacttcgtcgctcttgccgataaatatgctcacttaggtggcctatatcaagtaaca
gatgccatgcgtgaacttgccgcaaacaatggcagctactaccagtctaaataa
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