Shewanella benthica: SHEWBE_0688
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Entry
SHEWBE_0688 CDS
T06707
Symbol
rmlC
Name
(GenBank) dTDP-4-deoxyrhamnose-3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
sbk
Shewanella benthica
Pathway
sbk00521
Streptomycin biosynthesis
sbk00523
Polyketide sugar unit biosynthesis
sbk00541
Biosynthesis of various nucleotide sugars
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01250
Biosynthesis of nucleotide sugars
Module
sbk_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SHEWBE_0688 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SHEWBE_0688 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SHEWBE_0688 (rmlC)
Enzymes [BR:
sbk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
SHEWBE_0688 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
SQH74665
UniProt:
A0A330LXR0
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All DBs
Position
SHEWBE:complement(625618..626163)
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AA seq
181 aa
AA seq
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MNITDTPIAGLKLLAPHVHKDERGSFCETFRDSWFRQQIADVTFVQENHSRSIKGCLRGL
HFQSPRSQGKLIRVIIGEIFDVAVDLRQDSPSLGQWFGTYLSANNRQQMWLPAGFAHGFY
VTSNAAEIIYKCTDYYAPEFEKTLAWDDASLAINWPLEGQVPILSSKDNMGLSFDVITKG
V
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcaccgacacacccattgcgggtttaaaactacttgctcctcacgtccataaa
gacgagcgcggcagtttctgcgaaaccttccgtgactcctggtttaggcagcagatagcc
gatgtcactttcgtgcaggagaatcatagccggtcgataaaaggctgcttgagaggctta
cactttcaatcgccacgcagccaaggcaagttgatacgtgtaattattggcgagatattc
gatgtagcagtcgatctacgccaagacagcccaagcttaggccaatggttcggcacctat
ctatcggcaaacaaccgtcagcagatgtggctccccgcaggctttgcccacggcttttat
gtcacctcaaatgctgcggaaataatctacaagtgtaccgattattatgcccccgagttc
gagaaaaccctcgcctgggacgatgcaagcttagccataaactggcctttagaggggcaa
gtccccatattatcaagcaaagataatatgggactctccttcgatgtcatcactaagggc
gtgtga
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