Shewanella benthica: SHEWBE_0795
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Entry
SHEWBE_0795 CDS
T06707
Symbol
rpoH
Name
(GenBank) RNA polymerase, sigma 32 (sigma H) factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbk03021
]
SHEWBE_0795 (rpoH)
Transcription machinery [BR:
sbk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SHEWBE_0795 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Fe_dep_repress
UCR_14kD
GntR
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
SQH74772
UniProt:
A0A330LXV7
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All DBs
Position
SHEWBE:733858..734718
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AA seq
286 aa
AA seq
DB search
MTEQTQLMALVVPHGSGSLEAYVHSAHNISMLEAEQEYELAKRLQETGDIQAAKQLIMSH
LRFVVHVAKGYAGYGLPQADLIQEGNIGLMKAVKRFDPNVGVRLVSFAVHWIKAEIHEYV
LKNWRIVKVATTKAQRKLFFNLRKAKKRLGWFSDAEVGMVAENLGVSKADVTEMESRMAA
QDPAFDLVSDSDDDIQDYAPALYLEDHSSDLASKVETANLEASNQTRLLAAIKTLDERSQ
HILQARWLNEDKTTLQELAATYQVSAERIRQLEKNAMNKLKGRMEV
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacaaacgcaattaatggcacttgtggttccccatggaagcggtagcctggaa
gcttatgtccattcggcacacaacatttctatgttagaagccgagcaggaatacgagttg
gctaagcgtttacaggaaactggtgatatacaggcagcgaagcagctgattatgtctcat
cttcgtttcgttgttcatgttgctaagggttatgccggttacggcttacctcaggcagat
cttattcaagagggcaatattggtctgatgaaggcggttaagcgtttcgatcctaatgtt
ggggttcgcttggtctcttttgccgttcattggattaaagccgaaattcatgagtatgtg
cttaaaaactggcgcatagtaaaagtcgctaccactaaggctcagcgcaagctgttcttc
aaccttcgtaaggcgaagaaacgtcttggttggtttagcgatgcagaagttggcatggtt
gccgaaaatctgggcgtatctaaggccgatgtgaccgaaatggagtcacgcatggccgct
caagaccctgcgttcgaccttgtcagcgatagcgatgatgacattcaggactatgctccg
gccctatatctcgaagatcattcttcagatcttgcgagcaaagtcgaaactgctaactta
gaggccagtaatcaaactcgccttctggctgccatcaagaccctcgatgaacgtagccaa
catattcttcaggcccgttggttgaatgaagataagacgacgttgcaagagctagccgca
acttatcaggtttctgccgaacgtatcaggcagcttgagaagaatgccatgaacaagctc
aagggccgcatggaagtgtaa
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