Shewanella benthica: SHEWBE_0909
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Entry
SHEWBE_0909 CDS
T06707
Symbol
pdhR
Name
(GenBank) Pyruvate dehydrogenase complex repressor
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbk03000
]
SHEWBE_0909 (pdhR)
Transcription factors [BR:
sbk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SHEWBE_0909 (pdhR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
HTH_DeoR
HTH_41
MarR
HTH_11
MarR_2
LON_substr_bdg
TrmB
DUF2585
Fe_dep_repress
Motif
Other DBs
NCBI-ProteinID:
SQH74878
UniProt:
A0A330LZ57
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Position
SHEWBE:829840..830592
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AA seq
250 aa
AA seq
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MAYKKINQPKISDVIMGQLEQMILEGSLQPGQKLPPERELALQFEVSRPSLREAIQKLEA
KGLLLRRQGGGTYVKEQLWQSLADPIVELMHSDPESQYDLLEFRHAIEGMMAYFAALRGT
DADMQNIKRTIMDVEAAQEIEQQAEAIIHFYRAIAEASHNVAMLHLVLSLAPVLHKNVAE
NLELLNRREDASTRANEHRLALLAAIVRRDPDAAREASNEHLSYIEEVMLTVRKEDSRLQ
RSLRRLKSGD
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atggcttataaaaaaataaaccagccaaaaatttccgatgtcatcatgggtcaattagaa
cagatgattttggaaggcagcctacaaccgggtcagaagctgcctcctgagcgtgaactg
gcacttcaatttgaagtatcccgtccctcgttacgcgaagccattcaaaaattagaagct
aaaggcttgttgttgcggcgtcaaggcggtggcacctatgtcaaagagcagctttggcaa
agcttggccgatcccatcgttgaattgatgcatagtgaccctgagagtcagtatgatctg
ctcgaatttcgtcatgccatcgaaggcatgatggcttattttgccgcgcttcgtggcacc
gatgccgatatgcagaatatcaagcgcaccatcatggatgtggaagcggcgcaagagatt
gagcagcaagcggaagccatcatacatttctatcgtgccatagcagaggcgtcacataac
gtggccatgttgcatctggtactcagtttagctcctgtgctgcataagaatgtggcagag
aatctggaactgctgaatcgaagagaggacgcatccaccagggcaaacgaacataggctg
gcattgctagccgcaatcgttcgccgtgatcctgacgcggctcgtgaagcctcgaatgag
catttaagctatatcgaggaagtgatgttgaccgttaggaaagaagatagtcggttgcag
cgcagcctgcgccgtttaaaaagtggtgactag
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