Shewanella benthica: SHEWBE_1055
Help
Entry
SHEWBE_1055 CDS
T06707
Symbol
fumC
Name
(GenBank) Fumarate hydratase class II 1
KO
K01679
fumarate hydratase, class II [EC:
4.2.1.2
]
Organism
sbk
Shewanella benthica
Pathway
sbk00020
Citrate cycle (TCA cycle)
sbk00620
Pyruvate metabolism
sbk00720
Other carbon fixation pathways
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
sbk01200
Carbon metabolism
Module
sbk_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sbk_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sbk_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SHEWBE_1055 (fumC)
00620 Pyruvate metabolism
SHEWBE_1055 (fumC)
09102 Energy metabolism
00720 Other carbon fixation pathways
SHEWBE_1055 (fumC)
Enzymes [BR:
sbk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
SHEWBE_1055 (fumC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lyase_1
FumaraseC_C
STAR_dimer
Motif
Other DBs
NCBI-ProteinID:
SQH75024
UniProt:
A0A330M0E8
LinkDB
All DBs
Position
SHEWBE:979762..981138
Genome browser
AA seq
458 aa
AA seq
DB search
MTTRIERDSMGELEVPASALYGAQTQRAVNNFPISGKRMPEAFIRALLLAKSAAAQANAK
LALLPQDMADGISDAVSQLLDDKAMMQHFPVDVFQTGSGTSSNMNANEVLATLASRIANQ
TVGANDHVNYGQSSNDIIPSCIHISAAIELENRLLPALEHLLKVIKHKAAEVDHHIKTGR
THLMDAMPVRMSQSLLSWASQIEQNIDLIEGIKPRLHSLAQGGTAVGTGINAHADFAAEF
NHQLSEITGLTFTPASNFFSHIGTQDIAVSLSGQLKTLAVSMMKIANDLRWMNSGPLAGL
GEIELQALQPGSSIMPGKVNPVIPEAVTMVAAQVIGNDSAITVGGQAGNFELNVMLPMIA
DNLLSSLSLLANVSHLLADKAIATFKVNEVQLQKALARNPILVTALNPIIGYAKAAEIAK
KSYKEGRAVLDVAEEETDISREELEQLLDPAKLTLGGL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgactacacgtattgaaagagacagcatgggagagctagaggtgccggcgtcggcgcta
tatggagctcaaacacagcgagcggtgaataactttcccatcagtggcaagagaatgcct
gaggcatttattcgtgccttactcctggctaaatcggctgctgcccaggctaatgcaaag
ctagccttgctgccacaagatatggccgatggtatctcagatgcagtgtcgcaactactc
gatgataaggccatgatgcagcattttccggtggatgtgtttcaaaccggctcgggcact
agctcgaacatgaatgctaacgaggtattagccacgctagcgtctagaattgctaaccaa
accgtaggtgccaatgaccatgtcaattatggtcagagcagtaacgatatcatcccttcc
tgtattcatatcagtgccgccattgagttagagaatcgtttattaccggcactggaacat
ctgttgaaagtgattaaacacaaggccgctgaagtcgatcatcatatcaagacgggtaga
actcatcttatggatgccatgccagtgcgtatgagtcagagtctgctgagttgggcgagt
caaatagagcaaaatatcgacctgatcgaggggattaagccgagattacacagcctggcc
cagggagggacggctgtgggcacaggcatcaatgcccatgcagattttgccgcagagttt
aaccatcagctcagtgagatcaccggtctcacgtttactccggcgagtaattttttcagc
catattggcacacaagatattgcagtttcattgtcggggcagttgaaaacgctggccgta
tctatgatgaagatagcgaacgatctacgttggatgaattcgggacccttagccggtttg
ggggagatagagttgcaagccttgcagccgggttcatctatcatgccaggcaaggttaat
ccggtgatccccgaggcggtcactatggtcgcggctcaggtcataggtaacgatagcgcc
atcacagtgggcggccaggcgggaaatttcgaattaaacgtcatgttgcccatgattgcc
gataacttactttcgagcttaagcttgctggccaatgtcagtcatctattggcggataag
gccatagcgacattcaaggttaacgaggtgcaattgcagaaagccttggctcgtaacccg
attctagtcaccgcgctcaatcccattattggctatgctaaggccgctgaaattgctaag
aagtcttataaagaaggtcgggccgtactggatgtcgccgaggaagagaccgacatttct
cgtgaggagcttgagcagcttttagatccagccaaactcaccttaggtgggctttaa
DBGET
integrated database retrieval system