Shewanella benthica: SHEWBE_1143
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Entry
SHEWBE_1143 CDS
T06707
Symbol
rsgA
Name
(GenBank) ribosome small subunit-dependent GTPase A
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
sbk
Shewanella benthica
Pathway
sbk00730
Thiamine metabolism
sbk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SHEWBE_1143 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbk03009
]
SHEWBE_1143 (rsgA)
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
SHEWBE_1143 (rsgA)
Ribosome biogenesis [BR:
sbk03009
]
Prokaryotic type
GTPases
SHEWBE_1143 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
AAA_29
IIGP
AAA_15
GTP_EFTU
nSTAND1
AAA_23
ABC_tran
AAA_7
Roc
DUF7752
Motif
Other DBs
NCBI-ProteinID:
SQH75112
UniProt:
A0A330LYR0
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All DBs
Position
SHEWBE:complement(1054349..1055407)
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AA seq
352 aa
AA seq
DB search
MSKKKPLSQGQKRRMRANQDKRLQRKDSGRNAPELQDSSLEPEQLGTVISRFGQHADVEI
ESGQVVRCNIRRNIQSLVTGDKVIVRLAVEMTTRVAGVVEAVHPRFSLLSRPDLYDGIKI
IAANIDQILIVSSILPNFTTQIIDRYLVAAEDTGISPIIVLNKIELLTDEDRPEVEAALK
RYQDIGYQVYQISSHTGQGIDDIKALLNEKVSIFVGQSGVGKSSIINAMMPDAELAIGDV
SQNSGLGQHTTTTAKLMHFASGGDLIDSPGVREFALWHLPPERVGECFIEFREYLGTCKF
RDCKHKNDPGCAITEAFNDGKIAADRYNNYHKIIASLNEMRHARQFRASEEE
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaagaaacccctaagtcagggtcaaaaacgccgtatgcgagccaatcaagat
aaaaggctgcaacgtaaagattcaggtcgcaatgctcctgaattacaggatagttcactc
gagcctgaacagctcggaactgttatatctcgtttcggccagcatgccgatgttgaaatc
gaatcaggccaagttgtgcgctgtaatattcgccgtaacattcaaagcctggtcaccgga
gacaaggtgatcgtacgcttggccgtggaaatgacgaccagagtagccggcgtggttgaa
gccgttcaccctcgtttttcgttgctctcgcggccagacctctatgacggcatcaagatc
attgcagcaaatatcgatcaaattttgattgtctcttcgattctcccaaattttacgact
caaataatcgaccgttacttagttgcagcagaagacacgggtatttcaccgattatcgtc
ctcaataagatcgaactcctcaccgatgaagaccgtccggaagtagaagctgcactcaag
cgctatcaagatataggctatcaagtctaccaaataagcagtcatactggccaaggtatc
gatgacataaaagccttattgaatgaaaaagtcagtatcttcgtcggccaatccggtgtt
ggtaagtcatccatcattaacgccatgatgcctgatgccgagctagctattggcgatgtt
tctcaaaactcaggcctgggacaacacacgaccacgacggctaagttaatgcattttgct
agcggaggcgatctgattgattctccgggagtccgagagtttgcactatggcacctgcca
cccgaaagagtgggtgagtgttttatcgagttccgggaatatctaggcacttgcaaattc
agagactgtaagcacaaaaatgatcctggttgtgccatcacagaagcatttaatgatggc
aagatagcagcagatcgatacaataattatcataaaattatcgctagtctcaatgagatg
cgccatgccagacagtttagagccagcgaagaagaatag
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