Shewanella benthica: SHEWBE_1265
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Entry
SHEWBE_1265 CDS
T06707
Name
(GenBank) putative Outer membrane porin
KO
K14062
outer membrane protein N
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_1265
Transporters [BR:
sbk02000
]
Other transporters
Pores ion channels [TC:
1
]
SHEWBE_1265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_1
Motif
Other DBs
NCBI-ProteinID:
SQH75231
UniProt:
A0A330LZ59
LinkDB
All DBs
Position
SHEWBE:1165794..1167002
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AA seq
402 aa
AA seq
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MKKTLIATALAVVIFAPSVAAIEIYKDDKNAVEIGGFIDARVINTQGATEVVNGASRINL
GFTREMSDGWKAFTKLEWGVNPFGNSEIVYSSESNFESQSGDFLNNRLGYVGIGHDTYGT
LSIGKQWGAWYDVVYNTNYGFVWDGNAAGVYTYNKADGAINGTGRGDKVVQYRNSFGDVS
FAIQAQLKHDTFYTCEAAQDLGTDCEERWKANEESQEVNYDYTYGGSITYLATDKLTLTA
GVNRGEFEVAFNSGEMITATDLIYGVGATWGGFDSEGFYAAANFNKNENHDTDNLGRLIK
DSYGIESLFSYKFDNGLRPFISYNILDAGRDYVIQPNSADPNDVFKRQFIVAGLHYVWDV
STVLYVEARKDFSNFNSADKDQQVKMSIAEDDGVAVGIRYTL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagactttaatagcaactgcgttagcagtcgtcatatttgccccatcagtagcg
gcaatcgaaatttataaagatgacaagaacgcagtggagatcggtggattcattgatgcg
cgagttatcaatactcaaggcgctacagaagtcgttaacggcgcgtcgcggattaactta
ggtttcactcgtgaaatgagcgatggctggaaagcgttcactaagctggagtggggcgtt
aatccattcggtaacagtgaaattgtttatagtagtgagagtaacttcgagtctcagagt
ggagattttttaaataaccgtctcggttatgtcggtattggccatgatacgtacggtacc
ttaagcataggtaaacagtggggcgcttggtacgacgtggtttataacactaactacggc
ttcgtatgggacggcaacgcggcgggtgtctatacctataataaggccgatggtgcgatc
aatggtaccggtcgcggtgataaggtggttcaataccgtaacagtttcggtgatgtgagc
ttcgcaattcaagctcagctgaaacacgataccttttatacctgtgaggcagcacaagat
ctcggcactgattgtgaagaacgttggaaggctaacgaagagtcacaagaggtcaattat
gattacacctacggtggctctattacttatctggctacagataagctcacgttaaccgct
ggtgttaaccgcggtgagtttgaagtggcttttaatagcggtgaaatgataactgcaacc
gatcttatttatggtgtcggtgccacctggggaggcttcgatagtgagggcttctatgct
gccgctaatttcaacaagaatgaaaatcacgataccgataacctaggccgtttaattaaa
gactcttatggtatcgaatctctgttctcatataagtttgataatggtctgcgtccattt
atctcctataacatcttggatgcgggcagagattacgttattcagccaaacagtgccgat
ccaaacgacgtgtttaagcgccagttcatcgttgccggcctgcactatgtttgggatgtg
agcacagtgctctatgtagaagctcgtaaagattttagtaactttaacagtgcagacaaa
gatcaacaggtgaaaatgtctatcgcggaagatgatggcgttgccgtaggtatcagatat
acgctctaa
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