Shewanella benthica: SHEWBE_1334
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Entry
SHEWBE_1334 CDS
T06707
Name
(GenBank) Uncharacterized deaminase in luxG 3'region
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
sbk
Shewanella benthica
Pathway
sbk00240
Pyrimidine metabolism
sbk01100
Metabolic pathways
sbk01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
SHEWBE_1334
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
sbk02044
]
SHEWBE_1334
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
SHEWBE_1334
Secretion system [BR:
sbk02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
SHEWBE_1334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
Bd3614-deam
APOBEC3
APOBEC_N
SNAD4
HVO_2753_ZBP
EndoS_helical
NAD2
APOBEC2
Motif
Other DBs
NCBI-ProteinID:
SQH75300
UniProt:
A0A330M2M5
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All DBs
Position
SHEWBE:complement(1242118..1242570)
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AA seq
150 aa
AA seq
DB search
MMTKWATRFLQMAELVASWSKDPSTQVGAVITEDNRIVSLGFNGYPHGISDSAETDNREM
KLLKTLHAEENAILYAKRDLSGCEIWVTHFPCPNCAAKIIQTGLSTVHSPQPSADFLSRW
GDKIKISQDMLDQAGVKVDWMQLESSTASK
NT seq
453 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaaaatgggcgacacgttttctacagatggcagagcttgttgcatcttggagt
aaagacccctccactcaagttggggcggtgatcaccgaagataaccgcattgtctcttta
gggttcaacggctaccctcacgggatttccgatagtgccgaaaccgataaccgtgagatg
aagctgctaaaaaccctacacgcagaagagaatgccattctctatgctaagcgtgatctc
agcggctgcgagatctgggttacccacttcccctgccctaactgcgctgcaaagataatc
caaacgggtttgagcacagtgcatagcccacaaccaagcgcagatttcctgtcacgttgg
ggagataagattaaaataagccaagatatgctcgaccaagccggcgttaaagtcgattgg
atgcagctagagtcttcaactgcaagtaagtaa
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