Shewanella benthica: SHEWBE_1599
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Entry
SHEWBE_1599 CDS
T06707
Symbol
tyrS
Name
(GenBank) Tyrosine--tRNA ligase
KO
K01866
tyrosyl-tRNA synthetase [EC:
6.1.1.1
]
Organism
sbk
Shewanella benthica
Pathway
sbk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHEWBE_1599 (tyrS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbk01007
]
SHEWBE_1599 (tyrS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbk03016
]
SHEWBE_1599 (tyrS)
03029 Mitochondrial biogenesis [BR:
sbk03029
]
SHEWBE_1599 (tyrS)
Enzymes [BR:
sbk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.1 tyrosine---tRNA ligase
SHEWBE_1599 (tyrS)
Amino acid related enzymes [BR:
sbk01007
]
Aminoacyl-tRNA synthetase
Class I (A)
SHEWBE_1599 (tyrS)
Transfer RNA biogenesis [BR:
sbk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SHEWBE_1599 (tyrS)
Prokaryotic type
SHEWBE_1599 (tyrS)
Mitochondrial biogenesis [BR:
sbk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SHEWBE_1599 (tyrS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1b
S4
S4_2
TyrRSs_C
Motif
Other DBs
NCBI-ProteinID:
SQH75565
UniProt:
A0A330M0F5
LinkDB
All DBs
Position
SHEWBE:1482103..1483299
Genome browser
AA seq
398 aa
AA seq
DB search
MADLDQAFAEIKRGTDEILLEAELLEKLKEGRPLRIKLGADPTAPDIHLGHTVILNKMRT
FQELGHDVIFLIGDFTGMVGDPSGKNSTRPPLTREQVLANAETYKQQVYKILDPAKTRIV
FNSTWLEPLGAAGMIRLASKQTVARMMERDDFKKRYASGQSIAIHEFMYPLLQGYDSVAL
EADVELGGTDQKFNLLMGRELQKSEGQKPQTVIMMPLLEGLDGVKKMSKSANNYIGVSEP
AGEMFGKIMSISDVLMWRYFELLSFRPLGEIEQFKADIEAGANPRDIKIALAKEIITRFH
DEAAADAAHQEFINRFQKGAIPDDIEEVELSVGEGIAIANLLKELGFVKSTSDAMRMIKQ
GAAKIDGVKIEDTRLQLTAGTSGIFQVGKRKFAKVTLV
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttagaccaagcatttgcagagattaaacgcggtaccgatgagatattactc
gaggcggaactgctggaaaaattgaaagagggacgtcccttacgtattaagcttggagcc
gatccaaccgcgccggatattcatcttggtcacacagtgatcttaaataagatgcgtact
ttccaggagctaggccatgacgtaatcttcctgatcggcgatttcaccggcatggtaggc
gatcccagtggtaagaatagtactcgtcctccactgactcgcgagcaagtactcgctaat
gcagaaacctataagcagcaggtgtataagattttagacccggctaagacgcgcatcgtg
tttaactcgacctggctagagccattgggcgcggcgggcatgatccgtctcgcttctaag
caaacggttgcgcgtatgatggagcgagatgactttaagaagcgttatgcttcgggtcag
tcgatagccattcatgagtttatgtatcccttgctacagggttatgactcggtagccttg
gaagccgacgtcgaactgggcggtaccgatcagaagtttaacttgctgatgggacgcgag
ttacagaaatctgaggggcaaaagcctcagaccgttatcatgatgccactgcttgaaggc
ctggatggcgtaaagaagatgtccaagtctgcgaacaactatatcggtgtgagtgagcct
gccggtgagatgtttggtaagatcatgtctatctctgatgtgctcatgtggcgttacttc
gagctgttgtcattccgccctcttggcgagattgagcagtttaaggccgatatcgaagcc
ggagcaaatccgcgtgatatcaagatagccttagccaaagagatcatcacacgtttccat
gatgaagccgctgcggacgctgcccatcaggagttcatcaatcgttttcagaagggggcc
atcccggatgatatcgaagaggttgagctgagtgtgggtgaaggtatcgccattgccaac
ttgctcaaggagttaggcttcgtcaagtcgacctcggatgccatgcgtatgattaagcaa
ggcgcggccaagatagacggcgtaaaaatcgaagacacacgcctgcagctcactgccggt
acgagcggtattttccaggtcggtaaacgtaagtttgccaaggtgaccttggtttaa
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