Shewanella benthica: SHEWBE_1801
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Entry
SHEWBE_1801 CDS
T06707
Symbol
glgX
Name
(GenBank) glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
sbk
Shewanella benthica
Pathway
sbk00500
Starch and sucrose metabolism
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
SHEWBE_1801 (glgX)
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
SHEWBE_1801 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
SQH75767
UniProt:
A0A330M7M5
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All DBs
Position
SHEWBE:1666785..1668923
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AA seq
712 aa
AA seq
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MKITNGKPYPLGASVDDCGVNFALFSAHGTRVTLCIFDEHGHDEIGRFILPGKSQHIWHG
YLQGAREGLLYGYRVDGLFQPLSGHRFNANKLLLDPYAKQLVGECRDNPCHYSYILEGSE
QDLSFDTTDNAASMPKCRVVDYRQLGPVIPVKKNDSQEDVSLSLRRSIIYELHVKGFTQL
HPDIVKHQRGTFAGLASPESISYLTDLGITCIELMPVQSFFDEPFLQHKQLSNYWGYNSI
GFFAPHQGYLSGDDVFEFRHMVTEFHQAGIEVILDVVYNHTAEGNRLGPTYSFRGIDNLS
YYRLSPSEPRYYINDTGCGNTFNISHPNVLQLVMDSLRYWVEVMGVDGFRFDLATCMGRE
AHGFDTGSGFFDALAQDPVLSQTRLIAEPWDIGPGGYQLGQFPMGWSEWNDRYRDTIRRF
WRGDAGILPEFARRFHGSSDLFEHSGRPPAASINFVTSHDGFSLMDLVSYSLRHNQANGE
DNRDGHQENFSHNYGVEGVTDDADINRLRARQCRNILTTLFLSQGVPMLLAGDEVGHSQS
GNNNAYCQDSPLSWREWQQDSGSNALLQFTQKLIHLRKRFPLLCHHQYIHEGANVDAPGL
DWFCRQGGVMTKALWSETQTRSLSLVITGELEAIKGCRQALLLMLNTDEKSLDFCLPELD
NLSPWRCLLHTQDSELNPESVSLSTNSNPIYHLQDRSLMLFYAEFKEPVHEC
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactaacggcaagccttatccattaggagcgagtgtcgatgattgcggcgtc
aactttgccctgttttcggcccatgggactcgggtcactctgtgtatcttcgatgagcat
ggtcatgatgagatagggcggtttatcttgccgggaaagtcgcaacatatctggcatgga
tatcttcaaggggcgagagagggtctgttatatggatatcgcgtcgacggcttgtttcaa
ccgctatctgggcacaggttcaatgccaataagctcctgctcgatccctatgccaagcag
ttagtgggcgagtgccgtgataacccatgtcattacagttatatactcgaaggtagcgag
caagacctctccttcgacacgacagacaatgcggccagtatgcctaagtgtcgagtggta
gattatcgccagcttggcccagtgatcccggtgaaaaaaaatgatagtcaggaggatgtg
tcactttctctgaggcgcagcatcatctatgaactgcacgttaagggatttactcagctg
cacccggatattgtcaaacaccaaagaggcaccttcgccggactcgccagtcctgagtcg
ataagctatctcaccgatcttggtatcacctgtatcgagcttatgccggtgcagagtttc
ttcgatgagcctttcctgcaacacaagcaactgagtaactattggggctataacagcata
ggtttttttgccccacaccagggctatttgagtggtgatgatgtgtttgaatttcgtcat
atggtgactgaatttcatcaggcgggcatcgaagtgatcttagatgtggtctataaccac
accgccgagggcaatcgcctcggtccgacctacagtttcaggggcatagataacctaagt
tattaccgtttgagtcccagtgaacctaggtattacatcaatgataccggttgtggtaac
accttcaatatttcccatcctaatgtactgcaattggtgatggactcgctgcgttattgg
gtggaagtgatgggcgtcgatggttttcgtttcgatttagccacttgtatgggccgtgaa
gcccatggcttcgataccggttccggcttcttcgatgccttagctcaagatcctgtgctg
agccagacccgtttgatagctgagccttgggacataggtccgggtggctatcaattggga
caatttcccatgggctggagtgaatggaatgacagatatcgcgataccattcgccgtttc
tggcgtggggacgccgggatcttgcccgagtttgcccgacgttttcatggctcaagtgat
ctatttgaacattcaggccggccgccagccgccagtattaactttgtcaccagccacgat
ggcttctccttgatggatcttgtcagttacagcctgagacataatcaggccaatggcgaa
gacaatcgcgatgggcatcaggaaaacttcagtcataattatggtgtcgaaggtgtcact
gatgatgctgatattaataggctaagagcaaggcagtgccgcaacatactcacgactctg
tttttgtcccaaggcgtgcccatgttgctggcaggagatgaagtcggtcactcccagtca
ggcaataataacgcctattgccaagacagtccgctgagctggcgggagtggcaacaagat
agcggcagtaatgcactgctgcagtttactcagaagttaattcacctcagaaaacgtttt
cctttgctttgccatcatcaatacatacatgagggcgccaatgtggatgcacccggactc
gattggttttgtcgtcaaggtggagtgatgaccaaggccctgtggagtgagacccagact
cgtagcctgagtctggtgataactggtgagcttgaggcgataaagggctgtcgccaggca
ctgctcttgatgcttaacaccgacgagaaaagtctggatttttgtttgcctgagcttgat
aacctgtctccctggcgttgtctgttacacactcaagatagtgaattaaaccctgagtct
gtttcactttctaccaattcaaatccgatatatcacctgcaagacagaagcttgatgctg
ttttatgccgaatttaaggagcctgttcatgagtgttag
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