Shewanella benthica: SHEWBE_1882
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Entry
SHEWBE_1882 CDS
T06707
Name
(GenBank) TonB-dependent receptor family protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_1882
Transporters [BR:
sbk02000
]
Other transporters
Pores ion channels [TC:
1
]
SHEWBE_1882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
K1-lyase_N
DUF4957
Motif
Other DBs
NCBI-ProteinID:
SQH75848
UniProt:
A0A330M1K5
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All DBs
Position
SHEWBE:complement(1742641..1745490)
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AA seq
949 aa
AA seq
DB search
MMPVSSLSKAVRVALLATTSTALLASTSLYAAEEEEQVIERIEVTGSKIKRIGSLSATPV
TVITGAEMMKMGITNVADILNKLPSSTVGLSPETTNNFIFASGLNLTSLRGLGSDRTLVL
VNGRRFVAGSNGGSAVDLNTIPTAMVSRIEVITGGASAVYGSDAIAGVINIITRKDVEGV
ELDVSYIQPEQSGGEESQFSLTAGGNYLDDKLSTVFNFTYAEQKELRNTDRDFLNNPVNS
IYNPDWDPSVEDGTPARIPYFGRKPLSWINEAGSFDAADGGQYTFDSNGAMKVFDYGEGL
IEGPGNNGNYCGPSCEGYDPVNYGFVRTPLERMVFTLNTDYDIAEDHTLFTEITYVDYQS
NGESTPVFHTRNFIEADNAFLPEETRQLMSDTDMDYFNLYRIDTEFGNRTYNQDRETLRF
LIGLEGAITDEWEYSFHAQRGQLKETTVWGGEIWAERYDQAKDAVFADDGSIVCRDADAQ
AAGCVPLNLLGKNQASQEAIDWVSTSAGQTAKTTQTTAGLVVNGALFDVPAGYVSAAFSA
DYRKEESETKPDQALIDGTIFGNNSLPMQGEYDVMEFAAEFSIPLLSDMFLAHDLGLDLA
YRWMDYSTAGQDDAWKIGLNWSPIEDLRFRATKSKSVRAPNIGELFDPGGQTFESFKDVC
DAENVELGPDGNRKKNCQASGLPQGWSPTDGWYQSNTPGVNAGNPDLKPETSNDYTIGLV
YTPDYLDGFSLTVDYWAFEISDAIENISVDTAVRYCYDSVSLDNVYCDLFTRDASTGDII
DFLQAPVNSASFDVKGVDIETQYLIPTDSFGDFNIHLIATYLEQWETNPTGFAEDLQVDV
GEYTDPRWKAIFSLGWTYDALSLEARSNYRHSTVADNEWKPENNSYNDIPSHTVWDFTGS
YDFTESLTVRFGVKNAFDIAPPRNPYVYDGAGYYDTQGRAFFLGANYRL
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgatgccagtaagcagtttatcaaaagctgtaagagttgcgctacttgcaacgacgagt
acagcgctactagcaagtacaagcctatatgcagcagaggaagaagagcaagtcattgaa
cgaatcgaagtcactggttctaaaattaaacgaattggctctctatcagcaactccagta
actgtcatcacaggtgcagagatgatgaaaatgggtatcactaacgtcgctgatatcttg
aacaaactgccatcatcaaccgttggcctatctccagaaaccactaacaactttattttt
gcaagcggtttgaacctgactagtttacgtggccttggtagtgaccgaacgctagtattg
gtcaatggccgacgttttgtcgcaggttctaatggcggttctgctgtcgatttaaacacc
atcccgacagcaatggtctcaagaattgaggtcattacaggtggtgcatccgcagtttac
ggttctgatgctatcgcaggtgtgattaacatcatcacacgtaaagacgttgaaggtgtc
gagctggatgtttcttacattcagcctgaacaaagcggcggtgaagaaagtcagttctct
cttactgctggggggaattatctagacgataagctctctacagtatttaactttacctat
gctgaacaaaaagaattacgtaacactgacagagattttttaaataacccagtcaacagt
atttataacccggactgggacccgtctgtagaagatggtacgcctgcacgtatcccctat
tttggccgtaagccattatcttggatcaacgaggcaggttctttcgatgctgctgacggt
ggtcaatacaccttcgacagtaatggtgcgatgaaggtatttgattatggtgaagggtta
atcgaaggaccaggtaataacggtaactattgtggcccaagctgtgaaggctatgaccct
gtaaattacggtttcgtcagaacgccactcgagcgtatggtatttaccctaaacacggat
tatgacattgctgaagatcacacgctatttaccgagatcacctacgtagattatcagtct
aacggtgagagtacgccagtattccacacgcgtaactttatcgaagccgataacgcattc
ttgcctgaagagacacgtcagctaatgtctgacacagatatggattactttaacctatat
cgtatcgataccgagtttggcaaccgtacctataaccaagatcgtgaaacattaaggttc
ttaatcggactcgaaggtgcgattaccgatgagtgggaatattcattccatgctcagcgt
ggccagctaaaagaaacaactgtgtggggcggtgagatctgggcagagcgttacgatcaa
gctaaagatgcagtctttgcggatgacggcagtatcgtttgtcgtgatgctgatgctcaa
gcagccggttgtgtaccactaaacttactcggtaagaatcaagcgagccaagaagcgatt
gattgggtcagtacaagtgcgggtcaaacagctaaaacaacccaaactactgcaggctta
gttgtcaatggtgctttatttgacgtaccggcaggctacgtaagtgcagcatttagcgcc
gactatcgcaaagaagagtctgaaactaagccagatcaagcactaatcgacggcactatc
tttggtaataactcactgccaatgcagggtgagtatgacgtaatggaatttgcagcggaa
tttagcattcccctgctgtcagatatgttcctcgcccatgatctaggccttgatcttgct
tatcgctggatggattacagtactgctggacaagatgatgcctggaaaatcggtctaaac
tggtcgccaattgaagatttgagattccgtgcaactaagtctaagtcagttcgtgcgccg
aacattggtgaactgtttgatccgggcggacaaacatttgaaagtttcaaagatgtctgt
gatgcggaaaatgtcgagttagggccagatggaaaccgtaagaagaactgtcaagcgtca
ggccttccacaaggctggagcccaacggatggatggtaccagagtaatacccctggtgtt
aatgcgggtaatccagatctgaagcctgaaacatcaaatgactatacaatcggcctggtt
tacacacctgactatcttgatggcttctcattaacggttgattactgggcatttgaaatc
tcagatgcaattgaaaatatcagcgtagatactgcagttagatactgttatgactcggta
tctctagataatgtctactgtgatctcttcactcgagatgcgtcgactggcgatattata
gatttccttcaagcaccggttaactcagcatcattcgatgttaaaggcgtagatattgaa
actcaataccttattcctactgatagtttcggtgattttaacattcacctgattgccact
tatctcgagcagtgggaaacaaacccaactggttttgccgaagatttgcaggttgatgtg
ggtgaatacacagatccacgctggaaggctatatttagtttaggctggacgtacgatgca
cttagcttagaagcaagatctaactaccgtcattcaactgttgctgacaatgaatggaag
cctgagaacaacagctataatgatatcccatcgcacactgtgtgggactttactggttca
tatgacttcaccgaaagtctaacagttcgtttcggcgtgaagaatgcatttgatattgca
cctccacgtaacccatatgtttatgatggagctggttattatgacactcaaggacgtgca
ttcttcctaggtgctaattatagactctag
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