Shewanella benthica: SHEWBE_1920
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Entry
SHEWBE_1920 CDS
T06707
Symbol
truC
Name
(GenBank) tRNA pseudouridine synthase
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbk03016
]
SHEWBE_1920 (truC)
Enzymes [BR:
sbk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
SHEWBE_1920 (truC)
Transfer RNA biogenesis [BR:
sbk03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SHEWBE_1920 (truC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
SQH75886
UniProt:
A0A330LZZ7
LinkDB
All DBs
Position
SHEWBE:1786826..1787680
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AA seq
284 aa
AA seq
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MNQDKQDKQVSDMTQLQQVADNLVGEETIEETPPEIEILFEDDDIVAIHKPAGLLVHRSY
LARRERFFAMQLTRDKVGCHVFPVHRLDRPTSGVLLFAKSSEMANALCEQFADKTIEKHY
LAIVRGNMHEAATLDYPLKVELDDLGDKDVAADKPAQDAMTSYQPLLNTEIPFSSGRYAS
SRYALVKLTPHTGRKHQLRRHMAHLRHPILGDTTHGDGKQNKFFREHFSVNRLWLIAKQL
TFNHPRTGERMVIETELEHQWLDLFKGLGWDEETLASEASYLLA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccaagataaacaagacaaacaagtgagtgatatgactcagttgcaacaagtagca
gataatcttgttggcgaagagacaatcgaggagacgccccccgaaattgaaatcttattt
gaagatgacgatatcgttgcgattcataaacctgcaggtttactggtgcatcgatcatat
ttagctcgtcgggaacgattctttgccatgcaattgactcgagataaagtcggttgtcat
gttttccccgttcatcggctcgacaggccaacctctggggtattgttatttgctaagagc
agtgaaatggccaatgcattatgtgagcaatttgccgataagaccattgaaaagcattat
ctcgccatagtgcgtggcaatatgcatgaggcggctaccttagattatccattgaaagta
gagctcgatgatttgggtgataaagatgtcgctgcggataaaccggctcaagatgccatg
accagttatcagccattgttaaatactgagatccctttttcttctggtcgttatgcttcc
agtcgttatgcactggtgaagttaactcctcatacggggcgtaaacatcagctgaggcga
catatggcgcatcttagacacccaatccttggtgatacaacccatggagatggtaagcag
aataagtttttcagggaacatttttcggtgaacaggctttggcttattgctaagcaactc
acttttaatcatcccagaacgggagagcgtatggttatcgaaaccgagttagagcatcaa
tggctcgacctattcaaaggtttaggttgggacgaagagaccttggcgtcagaggcttca
tatctgttagcttag
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