Shewanella benthica: SHEWBE_1942
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Entry
SHEWBE_1942 CDS
T06707
Symbol
lpxB
Name
(GenBank) tetraacyldisaccharide-1-P synthase
KO
K00748
lipid-A-disaccharide synthase [EC:
2.4.1.182
]
Organism
sbk
Shewanella benthica
Pathway
sbk00540
Lipopolysaccharide biosynthesis
sbk01100
Metabolic pathways
Module
sbk_M00060
KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
SHEWBE_1942 (lpxB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sbk01005
]
SHEWBE_1942 (lpxB)
Enzymes [BR:
sbk01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.182 lipid-A-disaccharide synthase
SHEWBE_1942 (lpxB)
Lipopolysaccharide biosynthesis proteins [BR:
sbk01005
]
Lipid A
SHEWBE_1942 (lpxB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxB
Epimerase_2
Glyco_trans_1_4
Motif
Other DBs
NCBI-ProteinID:
SQH75908
UniProt:
A0A330M1P1
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All DBs
Position
SHEWBE:1807772..1808917
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AA seq
381 aa
AA seq
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MSENRQMIFAMVAGEISGDILGAGLIEALQECYPKARFIGIGGPQMEALGFESLFSYEEL
AVMGIVEVLSHLPRLLKVRKTLFAEICAIKPDCFIGIDAPDFNIGLELKLKQQGIKTVHY
VSPSVWAWRPKRIFKIAKATDMVLSLLPFEKAFYDEHKVPCTFVGHTLADDIPLSSDKIA
ARTALGLELHAEYLAVLPGSRGGELKLLAEPFVRAAKIIKQKYPDIRFVTPVVNAKRRAQ
FEAALKTYAPDLEIHIIEGHSREVMAASDCILLASGTATLEAMLVKRPMVVAYRVSPLTY
RIAKSLMLIDKYSLPNLLAGENLVTELIQENCTPEKIAAAVSMQLDGDFSKLESKFLELH
SQLRCNASARAAEAVVKLISH
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaaaacagacagatgatatttgctatggttgccggggagatctccggtgatatt
ttaggtgcaggcttaatcgaggcgctgcaagaatgctatcccaaggctagatttatcggt
attggcggacctcaaatggaagccttaggttttgaatctctgttttcttatgaagagctt
gccgtgatgggcatagtcgaagtcttgtctcatctgcctcgattattgaaagttcgtaaa
accttgttcgctgaaatttgtgctattaagcccgattgcttcatcggtatcgatgcaccg
gattttaacattggtctcgagctcaagctaaaacagcaggggatcaagacggtgcattat
gtcagtccttcggtatgggcttggcgaccaaaacgtatttttaaaattgctaaggcgaca
gatatggtgttgtcattgctgccttttgaaaaagcgttttacgatgaacataaagtgcca
tgtacatttgtgggtcacaccctggcggatgatattccgcttagcagtgataaaattgcg
gcacgtaccgcgctgggattagaacttcacgccgaatatctcgcagttttacccggttct
cgtggcggtgaacttaagctattagccgagcctttcgttcgcgcggcaaagataatcaag
cagaaatatccagatattcgcttcgtgactccagttgtgaatgctaagcgtcgtgctcag
tttgaggcggcactgaaaacatatgccccggatcttgaaatccatatcatagaaggccac
tcgagagaggtgatggccgcaagtgactgtatcttgttggcttctggcaccgcgacgctg
gaagccatgcttgtcaaacggcccatggttgtcgcctatcgtgttagcccgctcacttat
cgcatagccaagtctttgatgctgattgacaagtattctctaccgaacctgctcgctgga
gagaatttggtgaccgaactcattcaggaaaactgtaccccagagaagattgcagcggca
gtctctatgcagctcgacggtgatttcagcaaactcgagagtaagtttctcgaactccat
agtcagttgcgatgtaacgcgagtgctcgcgccgcagaggctgtggttaagcttatctct
cattag
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