Shewanella benthica: SHEWBE_1971
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Entry
SHEWBE_1971 CDS
T06707
Name
(GenBank) conserved membrane protein of unknown function
KO
K18218
tetracycline resistance efflux pump
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_1971
01504 Antimicrobial resistance genes [BR:
sbk01504
]
SHEWBE_1971
Transporters [BR:
sbk02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
SHEWBE_1971
Antimicrobial resistance genes [BR:
sbk01504
]
Gene variants
Tetracycline resistance genes
Transporters
SHEWBE_1971
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_H_antiporter
Motif
Other DBs
NCBI-ProteinID:
SQH75937
UniProt:
A0A330M837
LinkDB
All DBs
Position
SHEWBE:1832666..1834234
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AA seq
522 aa
AA seq
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MTILSYADSALSLLPPAVAILMAIVTRRVLLSLGMGILLGAVLINDFSVIASGQYLGEQV
AGLFWDDGAVNAWNMYLLGFLVLLGMITALITVSGAASAFADWARSHIKCKRDAKLLTMF
LGCVIFIDDYFNSLVVGSVARPLTDRYYVSRSKLAYILDSTAAPICVISPVSSWGAYIIA
LIGGILTAHGFTDSGHLSVFIQMIPMNFYAIFALLLLLCVVFWDLNVGPMRQHELNAQKG
NLYDEAKGLPPGANSDLPEAKNGKILGLFLPIIVLVLATFYFMVSSGGDVLAADGKPFSI
LGAFEHTDVASSLFFGALVGFIATLALVLIQGLDKSYLIKGLLAGARSMLPAIYILLFAW
TIAGVIGQLETGKYMASLASGNIPFALLPAVLFVLAGLTAFSTGTSWGTFGIMLPIAADM
AMGTNTSMMLPMLAAVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVITQLPYALIVAG
ISLGGYIVLGFTESLMAGLATCSILFVISILVLKFKSTQAIS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgacaattttaagttatgccgattcggcgctttcattgctgcctcctgcggtggcgatt
ctgatggcgattgttactcgtcgtgtattgctctctttggggatggggatattactcggc
gctgtattgataaatgatttctctgttatagcatcaggtcaatatttaggtgagcaagtt
gctggcttattctgggatgatggcgctgtcaatgcctggaacatgtatctgctaggcttc
ctagtgctgttagggatgatcaccgccctcattacagtgagcggcgcggcgagtgccttt
gccgattgggcaaggagccacataaagtgtaaacgtgatgctaagttgctgaccatgttc
ttaggttgtgtgatcttcatcgacgattatttcaatagtttagtggttggcagtgtcgcc
agacctctcaccgacagatattatgtctcccgcagtaagctcgcctatatattggactcg
acagctgcgcctatctgcgttatctcacctgtgtcgagttggggagcttatatcatcgcc
ttgatcggcggtattctcaccgcccatggttttacagattcaggacatctgagtgtcttt
atccagatgatcccgatgaacttctatgccatctttgcgctgctactcctgctttgtgtc
gttttttgggacctcaatgtaggccccatgcgtcagcatgagctcaatgcacagaagggg
aacctatacgatgaggctaaaggcttaccacccggtgctaactcagatcttccagaggcc
aaaaacggtaagattctgggattatttctgcccattatcgtattggtcttggcgaccttc
tatttcatggtgagtagcggcggagatgtcttagcagcagacggaaaacctttcagtatt
ctcggtgcatttgaacataccgatgtcgcctcatctctgttcttcggtgccctagtcggt
tttattgcgactctggctcttgtcttaatacagggattggataagtcatacttgattaaa
ggtctgctggccggtgctcgctctatgttgccagccatctatatcttgctatttgcctgg
acgattgccggtgtgattggtcaattagagacaggtaagtacatggcgagtctggcatcg
ggtaatattccctttgcgctgttacccgccgtgttatttgtgcttgcaggcctgacagcg
ttctctaccggcacaagctggggcacgttcggtatcatgctacctatcgccgcagatatg
gcgatgggcactaacaccagcatgatgttgcctatgcttgcggcagtgctcgctggtgcg
gtatttggtgaccactgctcgccaatctcagatacgaccatcctctcctccacgggggca
aattgtcatcatatcgatcatgtgatcactcaattgccctatgccttaattgtggcgggg
atcagcttgggagggtatatcgtactgggattcaccgagtctctgatggcaggactcgct
acctgtagtatcttatttgtgatcagtatcttagtcttgaagtttaaatctactcaggct
atcagctaa
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