Shewanella benthica: SHEWBE_2125
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Entry
SHEWBE_2125 CDS
T06707
Symbol
sapF
Name
(GenBank) antimicrobial peptide transporter subunit; ATP-binding component of ABC superfamily transporter
KO
K19230
cationic peptide transport system ATP-binding protein
Organism
sbk
Shewanella benthica
Pathway
sbk01503
Cationic antimicrobial peptide (CAMP) resistance
sbk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHEWBE_2125 (sapF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SHEWBE_2125 (sapF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_2125 (sapF)
Transporters [BR:
sbk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Cationic peptide transporter
SHEWBE_2125 (sapF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_22
SMC_N
oligo_HPY
AAA_29
AAA_16
NACHT
nSTAND3
DUF87
RsgA_GTPase
AAA_5
MMR_HSR1
AAA_18
AAA_14
NB-ARC
NPHP3_N
AAA
AAA_23
Motif
Other DBs
NCBI-ProteinID:
SQH76091
UniProt:
A0A330M1Q1
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All DBs
Position
SHEWBE:complement(1987669..1988451)
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AA seq
260 aa
AA seq
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MSKRFYAGYKGFKREYNQALFPVSFELNRGETLAIVGEAGSGKSTLARILVGAETRSSGE
IYFEGEALEKRNLKQRCKLIRMIFQDPNTSLNPKLTIGALLDEPLKFNTELNAKQRREQV
VDKLRKVGLLPEHADFYPHMISEGMKQRVAVARALMLDPKIIIADEALTALDLSVRSQIL
NLLLKLQKEMGLSYIFVSHNLSIIRHFSDKVMVLHHGKMVEKATTEELFNAPKHEYTQRL
VQELSLFSQKRLHRTIKKHG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagcgtttctatgcaggctacaaagggtttaaacgtgagtataatcaagctttg
tttccggtttcctttgagctcaacagaggagaaaccttagcgattgttggcgaagccggt
tcgggaaagagcaccctggcaaggatactcgttggcgccgaaacccgcagtagtggcgag
atctatttcgaaggggaagcgctggaaaaacgaaacctgaaacaaagatgtaagttgatc
aggatgatttttcaagatccaaacacatcactgaatcctaaattaaccatcggggctctg
ctcgatgaaccactgaagtttaataccgaactcaatgccaaacagcgtagggaacaggtc
gtcgataaactcagaaaagtgggtctgttacccgaacacgcagatttctaccctcacatg
atttctgaggggatgaagcaacgtgttgccgttgcccgtgcgctcatgctggatcccaaa
ataatcatcgcggatgaagctctcaccgccctcgacctttcggtccgctcacaaattctc
aacttattgttaaaacttcaaaaagagatgggactgtcttatattttcgtgtcgcataac
ctcagcatcattcgtcactttagcgataaggtgatggtgcttcaccatgggaagatggtt
gagaaagcgacaacagaagaattattcaatgcaccaaaacatgaatatactcaacgtctg
gtccaagagctaagcctctttagtcagaaacgactccacaggacaatcaagaagcatggt
taa
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