Shewanella benthica: SHEWBE_2174
Help
Entry
SHEWBE_2174 CDS
T06707
Symbol
sbcD
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbk03400
]
SHEWBE_2174 (sbcD)
DNA repair and recombination proteins [BR:
sbk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SHEWBE_2174 (sbcD)
Archaeal homologous recombinant proteins
SHEWBE_2174 (sbcD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
YqjI_C
Motif
Other DBs
NCBI-ProteinID:
SQH76140
UniProt:
A0A330M516
LinkDB
All DBs
Position
SHEWBE:2032749..2033894
Genome browser
AA seq
381 aa
AA seq
DB search
MKFIHTSDWHIGRQLHNQNLLEDQRFVLNQILDFAVEHDVDAVIIAGDIYDRSIPPANAV
ALLDEVVNRLVNELKIPIIMIAGNHDGHERLGFASRQMAGAGLHIVGPLSKDVAAIELKG
KQGSAVFYGLPYADPATVRHVFECEVTSHEEAMVKLLEQVHIHDSQGLPKVVISHCFLDG
GSESESERPLSIGGADRISPSLFTPFNYAALGHLHGPQYKGAEHVRYSGSMLKYSFSEQH
QHKSVTLVELDPQGVANISLLPLEAYRDVRIIEGQLAELLEQGKTDVNREDYLMVRLLDK
TAILDAMGKLRSVYPNVLHLERTGLMADNGKVALSRDHIKKGELDMFSDFFSQVSGEPMT
EAQQQAITAVIDDLHQVESAS
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccatacttcagactggcatatcggcaggcagctgcataaccagaatctg
ctcgaagatcagcgcttcgtgttaaatcagatccttgacttcgccgtcgaacatgacgtc
gatgcggtgattattgccggtgacatctatgacaggtctattccaccggcgaatgccgtg
gcgctgctcgatgaggtggtgaatcgtctcgttaatgaactcaagatacccattatcatg
atcgccggtaaccatgatggccatgagcgtcttggttttgcctcgagacagatggcgggc
gccgggttgcacatcgtaggtccgctgagcaaagacgtcgcggctatagagcttaaaggc
aagcagggcagtgctgttttttatggcttgccctacgccgatcccgccactgtgcgccat
gtgtttgagtgtgaagtgaccagtcatgaagaggccatggttaaattgcttgagcaagtg
catattcatgacagtcaaggcttacccaaagtggtgatcagccactgttttctcgatggt
ggcagtgagtctgagtctgagcgtccgctgagcataggcggcgcggatagaatctctcca
agtttatttacgccgtttaattatgcggcgctgggtcatctccatgggcctcagtataag
ggggctgagcatgtcaggtattcaggttccatgcttaagtactctttcagtgagcagcat
cagcacaaatcagtcaccttggtcgagttagatccccagggcgtggcaaatatcagcctt
ttaccgctcgaggcttatcgagatgtgcgcatcatcgaagggcaattggctgagttactc
gagcaaggaaaaacagacgtcaatcgtgaagattacctgatggtgagactgttagataaa
accgccatattagatgccatgggtaagttgagaagcgtataccctaatgtgctgcacttg
gagcgtacgggcttgatggcggacaatggcaaggtcgcactgagtcgggatcatatcaag
aagggtgagttggatatgttcagtgacttcttctctcaggtatccggtgagccaatgacg
gaggcccaacaacaggccatcactgcagtaatcgatgatttacaccaggtggagagtgca
tcatga
DBGET
integrated database retrieval system
