Shewanella benthica: SHEWBE_2209
Help
Entry
SHEWBE_2209 CDS
T06707
Symbol
yfcX
Name
(GenBank) fused enoyl-CoA hydratase and epimerase and isomerase; 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sbk
Shewanella benthica
Pathway
sbk00071
Fatty acid degradation
sbk00280
Valine, leucine and isoleucine degradation
sbk00310
Lysine degradation
sbk00362
Benzoate degradation
sbk00380
Tryptophan metabolism
sbk00410
beta-Alanine metabolism
sbk00640
Propanoate metabolism
sbk00650
Butanoate metabolism
sbk00907
Pinene, camphor and geraniol degradation
sbk00930
Caprolactam degradation
sbk01100
Metabolic pathways
sbk01110
Biosynthesis of secondary metabolites
sbk01120
Microbial metabolism in diverse environments
sbk01200
Carbon metabolism
sbk01212
Fatty acid metabolism
Module
sbk_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SHEWBE_2209 (yfcX)
00650 Butanoate metabolism
SHEWBE_2209 (yfcX)
09103 Lipid metabolism
00071 Fatty acid degradation
SHEWBE_2209 (yfcX)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SHEWBE_2209 (yfcX)
00310 Lysine degradation
SHEWBE_2209 (yfcX)
00380 Tryptophan metabolism
SHEWBE_2209 (yfcX)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SHEWBE_2209 (yfcX)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SHEWBE_2209 (yfcX)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SHEWBE_2209 (yfcX)
00930 Caprolactam degradation
SHEWBE_2209 (yfcX)
Enzymes [BR:
sbk01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SHEWBE_2209 (yfcX)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SHEWBE_2209 (yfcX)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SHEWBE_2209 (yfcX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
SQH76175
UniProt:
A0A330M2B9
LinkDB
All DBs
Position
SHEWBE:2069294..2071426
Genome browser
AA seq
710 aa
AA seq
DB search
MEKTFNLVRREDGIAVLTIDVPGETMNTLRTEFGPEITEILAEIKADNSIKGLVLASAKK
DCFVAGADISMLDACTSVEDAKALSQQGHRVFNELEAMSIPVVAAIDGVCLGGGLELALA
CHQRVCSQNSKTMMGVPEVQLGLLPGGGGTQRLPRLVGITTALDMMLTGKQIRPKQALKM
GLVDDVVPESILLATAVEMALKGKRVPKKVKKSLLNKLLEGTSFGRNIIFDQAGKQVQQK
TQGNYPAPAKIIDCVRQGMAKGKTTGLEVEASHFAELVMSTESAALRSIFFATTEMKRET
GAGDVVPRKVNKVMVLGGGLMGGGIASVTTSKAKIPARVKDISEQGLSNALSYAYKLLDK
GVKRRHMTPSARDNIMSLMTTTTEYKGIKDADIVVEAVFEDLNLKHQMVKDVERECGENT
IFASNTSSLPISQIAEAATRPENIIGLHYFSPVEKMPLVEVIAHKKTSPETIATVVAFAR
KQGKTPIVVQDGAGFYVNRILALYMNEAAQLLLEGQSVDHLDKALVKFGFPVGPMTLLDE
VGIDVGAKISPILAAELGERFKAPAAFDKLLGDDRKGRKNGKGFYLYGKKSNKKAKRVDE
SVYKLLGLTPGTSTPGELADIAERCVVQMLNEAVRCLEEGIIASPRDGDIGAIFGIGFPP
FLGGPFHYIDTLGAGVLVAKLETYQAKHGDRFAACDKLKQMAETNQRFFD
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagacatttaatttagttcgccgtgaagatggcatcgccgtactgacgatagat
gtacccggcgaaaccatgaataccttgcgcaccgagtttggccccgagatcactgaaata
ttggcggaaattaaagccgataacagtatcaagggcttagtgttagcttcggcaaagaaa
gattgtttcgttgccggtgcagatatctcaatgttggatgcttgtacctcggtggaagat
gctaaggcgctgtcacagcaaggacatagagtctttaacgaactcgaagccatgtcgatc
cccgtggttgcggcgatagatggtgtgtgtctgggcggcggtttggaactggcattggct
tgtcatcaaagagtgtgtagccaaaatagtaagaccatgatgggcgtgcctgaggttcag
ctaggcctgttgccaggtggcggtggaacccagagattacctagactcgttggtatcact
acggcgttagatatgatgctaacgggtaagcagatccgccctaagcaagcgttgaagatg
ggcttggtcgacgatgtcgtccccgagtcgatactgttagctaccgccgtggaaatggcg
ctgaaaggtaaacgtgtccctaagaaagtgaaaaagtctctgcttaacaagttgctcgaa
ggcacatcttttggccgaaatatcatcttcgaccaagcgggtaagcaagttcagcagaag
actcaaggcaattaccccgcgccggcaaagattatcgactgcgtgcgtcaaggcatggct
aaggggaaaaccacagggcttgaagtcgaagccagccatttcgccgagctggtgatgtcg
acagagtcggccgcattaagaagcatcttctttgccacgaccgagatgaagagagagacc
ggtgccggagatgttgtgcctcgtaaggtcaacaaggttatggtactcggtggcggcctc
atgggcggcggtattgcctcggtgacgaccagcaaagccaagatcccggcaagagtgaaa
gatatcagtgagcaggggcttagcaacgcactctcttatgcttataaactgctcgataaa
ggtgtaaagcgtcgccatatgacgccatcggccagagacaatatcatgtcgctgatgacc
acaaccacagaatataaaggcatcaaagatgccgatatcgtggttgaggcggtgtttgaa
gacttgaaccttaagcatcagatggtaaaagacgtcgaacgtgagtgtggtgagaacacc
attttcgcttcaaatacctcttcactgccaatctcacagattgccgaggcggctactcgt
cccgaaaatatcatcggtctgcattacttttctcccgttgagaaaatgcccttggttgaa
gttatcgcgcataagaaaacctcgcccgaaaccatagcaaccgtggttgcttttgcccgc
aagcaagggaaaacgcccatcgtcgttcaagacggcgccggtttctatgtcaatcgtatt
ctagccctgtatatgaatgaagcggcgcaattgctactcgagggccagagtgtagatcat
ctggacaaggcgctggttaagtttggtttccctgttggccctatgacgctactcgatgaa
gtcggtattgatgtaggcgcgaagatttctcctatattggcagccgagttaggtgagcga
tttaaggcgcctgcagcgttcgataagttgcttggcgatgacagaaaggggcgtaagaac
ggcaagggcttctacttgtatggcaagaagagcaacaagaaggccaagcgggtcgatgag
agtgtgtataaactgctggggttgactccaggcactagcactccgggcgagcttgccgac
attgcggagcgctgcgtggtgcagatgctcaatgaggcggtgcgttgtttggaagagggg
attatcgcctcacctcgtgacggtgatattggtgctatcttcggtatcggcttcccgcca
ttcctgggtggaccattccactatattgatacgctgggagcaggcgtcttagttgctaag
ctagagacataccaagctaagcacggcgacagatttgcagcttgtgataagttaaagcag
atggctgagaccaatcagcgcttcttcgattga
DBGET
integrated database retrieval system
