Shewanella benthica: SHEWBE_2639
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Entry
SHEWBE_2639 CDS
T06707
Symbol
ycaJ
Name
(GenBank) recombination protein
KO
K07478
putative ATPase
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SHEWBE_2639 (ycaJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MgsA_C
AAA_assoc_2
AAA
RuvB_N
Mg_chelatase
AAA_16
AAA_5
AAA_30
AAA_22
AAA_19
Sigma54_activat
AAA_14
nSTAND3
Parvo_NS1
ResIII
AAA_2
DUF815
AAA_3
RCF1-5-like_lid
Sigma54_activ_2
AAA_28
AAA_24
AAA_11
NPHP3_N
RNA_helicase
ABC_tran
MeaB
AAA_25
AAA_17
Bac_DnaA
AAA_18
DUF5906
Zeta_toxin
AAA_7
Motif
Other DBs
NCBI-ProteinID:
SQH76602
UniProt:
A0A330M324
LinkDB
All DBs
Position
SHEWBE:2518032..2519363
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AA seq
443 aa
AA seq
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MSSFSFDFAPDFRPLAARMRPEVLEQFVGQSHLLGEGKPLRQALEAGRAHSMLFWGPPGT
GKTTLAELVAHYVNAHVERISAVTSGVKEIRTAIEHAKNVAESRGQRTLLFVDEVHRFNK
SQQDAFLPFIENGTVIFVGATTENPSFEINNALLSRVRVYLIKRLTNDEIIQIVRQALID
DERGLGKRQLKIPDTVAEKLANVCDGDARKALNLIELMSDVIADGESFTEQMIIDVAGQQ
LAGFDKNGDQFYDLISAVHKSIRGSAPDAALYWFCRMLEGGCDPLYIARRLLAIASEDIG
NADPVAMTVALNAWECFHRVGPSEGERALAQAIVYLASAPKSNAVYTAFKAARQLARETG
QDAVPEHLRNAPTQLMQDLGYGEGYRYAHDEPNAYASGENYFPQRLAQSRFYYPTEHGFE
KRIKAKLAHLAQLDKDSEVKRYE
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagttttagtttcgatttcgccccggatttcagacctttggccgcgcgtatgcgt
cccgaagtgttggaacaattcgtaggtcaatcacatctgttaggtgaggggaagccactt
cgtcaagcactcgaagccgggcgcgctcattcgatgttgttttgggggccgccggggacg
ggaaaaacgacgctggcagagctcgttgcccattatgtcaatgctcatgttgaacgtatt
tcagcggtaacgtccggtgtgaaggagatccgcacggcgattgaacatgctaaaaatgtc
gcagaatctcgtggtcaaagaaccttactctttgttgatgaagtacacaggttcaataag
agtcagcaagatgccttcttgccctttatcgaaaatggaacggttatttttgtcggtgcg
accacagaaaacccctcatttgagattaataatgccctgttatcccgggtaagggtctat
ctgattaagagactgaccaatgatgagatcattcaaattgtcaggcaggcattaattgat
gatgagcgtggtctgggtaaaaggcagctcaagatacccgatacagtggccgaaaaactg
gctaatgtgtgtgatggtgatgcacgtaaagcactgaatttaattgaattgatgagtgat
gtgatcgcagatggagagtcattcaccgaacagatgatcatcgacgtcgccggtcaacag
ctggcagggttcgataaaaatggcgaccagttttatgatctcatctcagccgtgcataag
tcgattcgaggctcggcgcccgatgccgcgctttactggttctgtcgaatgttagaagga
ggctgtgaccctctctatattgctcgtcgactacttgcaattgcctctgaagatataggc
aacgccgatccagtcgccatgactgttgcgctcaatgcatgggaatgttttcatcgcgtg
ggtccatcagaaggtgagcgcgcgttggcacaagccatcgtctatctcgccagtgcacct
aagagtaacgcggtttacaccgcgttcaaggccgcccgtcaactggcgcgagaaacgggt
caagacgcagtgcctgagcacctacgtaacgcaccgactcagttgatgcaagatcttggt
tatggtgaaggttaccgctatgcccatgatgaacctaatgcctatgccagtggagagaat
tattttcctcaaagactggctcagagccgattttattacccaacggaacatggctttgag
aagcggatcaaggctaaattagcgcatcttgctcagctcgacaaggacagtgaggttaaa
cgatatgaataa
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