Shewanella benthica: SHEWBE_2641
Help
Entry
SHEWBE_2641 CDS
T06707
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase; also charges selenocystein tRNA with serine
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
sbk
Shewanella benthica
Pathway
sbk00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SHEWBE_2641 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbk01007
]
SHEWBE_2641 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbk03016
]
SHEWBE_2641 (serS)
Enzymes [BR:
sbk01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
SHEWBE_2641 (serS)
Amino acid related enzymes [BR:
sbk01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
SHEWBE_2641 (serS)
Transfer RNA biogenesis [BR:
sbk03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SHEWBE_2641 (serS)
Prokaryotic type
SHEWBE_2641 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ERM_helical
FlgN
HK
Motif
Other DBs
NCBI-ProteinID:
SQH76604
UniProt:
A0A330M5C3
LinkDB
All DBs
Position
SHEWBE:2519749..2521035
Genome browser
AA seq
428 aa
AA seq
DB search
MLDPKFFRNELEVTAERLATRGFILDVERLSKLEEKRKSLQMATEELQASRNAISKSIGQ
AKAKGEDVAPIMAKVGDLGNELDAKKSELSALLAELSVIAMSVPNLPDESVPLGADESEN
VEVRRWGTPKQFNFEVKDHVDLGEALGGLDFKGAVKLSGSRFIIMKGQIARMHRALAQFM
LDLHTDEHGYTEVYVPLLVNEDSLLATGQLPKFGEDLFHTKPATEEGQGLSLIPTAEVPL
TNMARDTIIDEDELPIKLTAHTPCFRSEAGSYGRDTRGLIRQHQFDKVELVQLVKPEDSM
AALDALTGHAETVLQKLALPYRTVILCTGDMGFGASKTYDIEVWVPAQNTYREISSCSNM
QDFQARRMQARYKVKSAKKPALLHTLNGSGLAVGRTLVAVLENYQNEDGSITVPEVLRPY
MNGLEKIA
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgttagatccaaaattttttcgtaacgaattagaagtcacggctgagcgtctggctact
cgaggttttattctggatgttgagcgtctcagtaagttagaggaaaagcgtaagtcatta
cagatggcgaccgaagaactgcaggcatcccgtaacgccatctcgaaatctatcggtcag
gcgaaagcaaagggtgaagatgttgcgcctatcatggctaaagttggtgatcttggtaac
gaactggatgcaaaaaaatctgagttgtcagccttattagcagaactgagtgtcattgcg
atgagcgtgcccaatttacccgatgagtcagtccctttgggcgccgacgagagtgagaac
gtcgaagttcgtcgctggggcacacctaaacaatttaactttgaagttaaagatcatgtc
gatcttggtgaagcactcggtggcctagatttcaaaggtgccgttaaattgagcggttca
cgtttcatcatcatgaaaggtcaaatcgcccgcatgcatcgtgccttggctcagttcatg
ttagatctgcacacagatgagcacggttataccgaggtatatgtgcccctgctggttaat
gaagacagcttgttagccacgggtcagttacctaaatttggtgaagacctgttccacact
aaacccgctacagaagaaggacagggcctgagtcttatcccgacggctgaagtgccactg
actaacatggctcgtgacaccatcatagatgaagatgagctgccgattaagctcaccgct
catacgccttgcttcagaagtgaggccggttcatatggccgtgacactcgaggtcttatt
cgtcagcaccaatttgataaagtagagcttgttcaactggttaagcctgaagattcgatg
gctgcattggatgcattaactggtcatgccgaaactgtactgcaaaagctagcactgcca
taccgcaccgttattctctgtactggcgatatgggcttcggcgcaagcaagacctatgat
atcgaagtctgggtaccggctcagaatacttatagagagatctcatcttgtagcaacatg
caagatttccaggcccgtcgtatgcaagcgcgttacaaggtaaaatctgccaagaaacct
gcattgttgcacacgttaaatggctcaggtctggcggtaggtcgtacactcgtggctgtg
cttgagaactatcaaaacgaagatggcagtattacagtgccggaagtgttgcgtccgtat
atgaatgggctcgaaaaaatagcttga
DBGET
integrated database retrieval system
