KEGG   Shewanella benthica: SHEWBE_2728
Entry
SHEWBE_2728       CDS       T06707                                 
Name
(GenBank) UvrD/REP helicase family protein
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
sbk  Shewanella benthica
Brite
KEGG Orthology (KO) [BR:sbk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbk03400]
    SHEWBE_2728
Enzymes [BR:sbk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SHEWBE_2728
DNA repair and recombination proteins [BR:sbk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SHEWBE_2728
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C UvrD_C_2 Zn_ribbon_Top1 AAA_30 AAA_12 ResIII AAA_11
Other DBs
NCBI-ProteinID: SQH76691
UniProt: A0A330M3C3
LinkDB
Position
SHEWBE:complement(2609701..2612706)
AA seq 1001 aa
MELRRHEVTFGFLQGLFFGKTASLCELGLTIDGKLFTYPSIEQAVEVRAGWFTQTLVWGC
NKFTFFRFIPSKPLFKFAKHNRLVFCKPSLLAAYDDLLVNIAKFDKEFRQHQRYLRHSDR
ARLHQDYSGTLAGFKQTVHFKKLGFDVTKLNCRLAKFIKQPQQFTAKYNQWWQDKQLESY
QTLFDSLEDNPLTPLQRQACVIDENNTLVIAGAGTGKTSTLVAKAAYLVKQGLAKPNEIL
MLAYGKDAMIELKQRLVAIAGLNSVKVSTFHGLGKEIIQSYLGESSQVSVLASDTKKFTQ
FVDQQIDAIVADSKMADPVADYFGRYLYPQINELDFQTQGQYRSYLKNNEIRALSGDLVK
SFQELTICNYLFTHGIQFQYEPKYQPENGISVSEPGKSVYQPDFYIPALDAYLEHFGIDK
QGLAPKGSRPDIDKIAYNLSREWKIDTHKRHNTCLLQTFSWQADLGELELRLEALLCERC
EQIGLAQNQLFKPISPEEVFAQVKALGIYRNVSRLMSSFLSLFKASSLSLADLELIKLTP
ASDKKGDKKSTLYNQVRWKAFLHLFRWVITKYEAHLSSLKTLDFSDMISQGIEMTQASDF
HQQTQGQFRFKYIMVDEFQDISAERAKLVTQLRDSSPGCALFCVGDDWQAIYRFTGSDLT
LTTEFKRVFGETRVVTLDKTFRFNDRIEKVASGFIQANPAQLKKTLTTNTVSDNPEVCLL
INSKEAGLAQAFNSIVEAISSKSTAGLDSDSGPGKGADSTSVMVIGRFKSSLKDLSVWQK
RYSQLNISGFSAHGSKGKQADFVIVLDVNDDQYGFPSKIANDPILEALLPKLDDYAYTEE
RRLFYVALSRAKQTVFIQAELGKESVFVKELLKFTADVRCYLSDLAPLYIESLSCPECKE
GKLIPIEGRYGLYYTCSLGKHYCDTKLDACTSCKSAPMLRNDTHHICASEKCDHQLPVCP
ECISGKLIKRTNSKSGKEFLACSLHRMKDAHSCQYTSRLAG
NT seq 3006 nt   +upstreamnt  +downstreamnt
atggagcttaggcgacatgaggttacatttggttttcttcaagggttgttttttggtaaa
acggccagcttgtgtgagctaggcttaaccattgacgggaaattattcacctatccgagt
attgaacaagcggttgaggtgagggcgggctggtttacacaaactttggtatgggggtgt
aataagtttacttttttcaggtttatccccagtaagcctttgttcaaattcgccaaacac
aacagactcgtgttttgtaagccaagtttactggcagcttatgatgacttgctggtcaat
attgccaagtttgataaagagtttaggcagcaccaacgctatttacgtcattcagataga
gcccgtttacaccaagactatagtggaaccttggcagggtttaagcaaactgtgcatttc
aaaaaattagggtttgatgtcaccaagctcaattgccgactggctaagtttattaagcaa
ccgcagcagtttacggctaaatacaatcaatggtggcaagataagcagttagagtcttat
cagactctgtttgattcgttagaggataatccgttaacaccactgcagcgccaggcgtgt
gttatcgatgaaaacaacaccctagtcattgccggtgcgggtacaggtaaaaccagtacc
ctggtggccaaagccgcgtatctggtcaaacaaggtttagccaagcccaatgaaattttg
atgttggcttatggtaaagatgccatgatcgaacttaaacagcggcttgtcgctattgct
ggcctaaactcggtaaaagtgagtacctttcatggcctaggtaaagagattattcaatct
tacttaggcgagtctagtcaagtgtctgtgcttgccagtgatactaaaaagtttactcaa
tttgtcgatcagcagatcgatgccattgtcgccgactctaaaatggccgatcctgttgcc
gattattttggtcgttatctgtatccccaaatcaatgaactggattttcaaactcagggc
caatatcgctcataccttaaaaataatgagataagagcgctttcgggtgacttggtgaag
agctttcaagaactcaccatctgtaattacctatttacgcacggcatacaatttcagtat
gaacctaagtatcagcctgaaaatgggatttcagtgagtgaaccggggaaaagtgtttat
caacctgacttttatattccggcactcgatgcttatctggaacatttcggcatagataag
caaggcctagctcccaagggaagtcggcccgatatcgataaaatagcctataaccttagc
cgtgaatggaaaattgacacccataaacgtcataacacctgtttattgcagacttttagc
tggcaagccgacttgggcgagcttgagctgcgtttagaggccctattatgtgagcgatgt
gagcagatagggctggcacaaaaccaactgtttaagcctatatcacctgaagaggtgttt
gctcaggtaaaggccttgggcatttaccgcaatgtcagtcgacttatgtcgagttttctg
tctctttttaaagcctcgagcttgtctttagccgatcttgagctgattaagctgacacca
gctagtgataaaaagggagataaaaaaagtaccctttataatcaagtcaggtggaaggcc
tttctgcacctgtttagatgggtgataactaagtatgaggcgcaccttagttcgcttaag
accttagatttttcagatatgatcagtcaaggcattgagatgacacaagcgagtgacttt
catcagcagacgcaaggtcaatttcgttttaaatacatcatggtcgatgaattccaggat
atttcggcagagcgcgctaagttggtgactcagttacgggattcaagcccgggctgtgcg
ctattttgtgtcggcgatgattggcaggctatttatcgctttaccggcagtgaccttacc
ttaaccaccgaatttaagcgggtgtttggcgagactcgagttgtcaccttagacaagacc
tttagatttaacgataggattgagaaggtcgcctcaggctttattcaggctaacccggca
cagcttaagaaaaccctgaccaccaacacagtgagtgataacccggaagtctgcttattg
attaattcaaaagaggccggattagcgcaagctttcaatagcattgtcgaagccattagc
tctaagtcaactgcaggcttagactctgactctggtccagggaaaggagcagactctacc
agtgtgatggtgatcggtcgttttaaatcctcattgaaagatttaagtgtctggcagaaa
cgttattcacaactgaatatctcaggtttctcggcccatggttcgaaaggtaagcaggcc
gactttgttatcgtgctcgatgtgaatgatgaccagtatggtttcccgagcaagatagcc
aatgatccgattttagaagctctgctgccaaaacttgatgattatgcttataccgaagag
cgccgcttgttctatgtcgccttgtcccgagctaagcagacggtatttattcaagcggag
ctgggtaaagagtctgtttttgttaaagagctgcttaagtttacagccgatgttcgctgt
tatctcagcgatctcgcgcctctgtatatcgagtctttgtcttgcccagaatgtaaggaa
ggtaaactcattcccatagaagggcgctacggactctattacacttgctcattaggcaaa
cattattgcgatactaagctagacgcgtgcacatcctgtaaaagtgcccccatgctgcgt
aatgatacccaccatatctgtgcatcggaaaagtgtgaccatcagctaccagtttgccct
gaatgtatttcaggcaagcttatcaagcgcaccaacagtaaaagcggtaaagaattttta
gcttgtagcctgcaccgcatgaaagatgcgcatagctgtcaatataccagtaggttggcg
ggttaa

DBGET integrated database retrieval system