KEGG   Shewanella benthica: SHEWBE_2793
Entry
SHEWBE_2793       CDS       T06707                                 
Symbol
nrdA
Name
(GenBank) ribonucleoside diphosphate reductase 1, alpha subunit
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
sbk  Shewanella benthica
Pathway
sbk00230  Purine metabolism
sbk00240  Pyrimidine metabolism
sbk01100  Metabolic pathways
sbk01232  Nucleotide metabolism
Module
sbk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
sbk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:sbk00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SHEWBE_2793 (nrdA)
   00240 Pyrimidine metabolism
    SHEWBE_2793 (nrdA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbk03400]
    SHEWBE_2793 (nrdA)
Enzymes [BR:sbk01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SHEWBE_2793 (nrdA)
DNA repair and recombination proteins [BR:sbk03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SHEWBE_2793 (nrdA)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone Mt_ATP-synt_D
Other DBs
NCBI-ProteinID: SQH76756
UniProt: A0A330M2G2
LinkDB
Position
SHEWBE:2690430..2692718
AA seq 762 aa
MNSNMKVTKRSGKRENIDLEKIHRVITWAAKDLKNVSVSEVELRSHLQFFDGIPTEAIHE
TIIKAAADLISLEAPDYQFLSARLAIFHLRKKAFGQFEPPALYDHVVKLVKAGKYDQHIL
EDYSREELDILDTYVDHWRDMSFSYAAVKQLEGKYLVQNRVTHEIYESAQFLYILVAACL
FAKYPQETRLSYIKRFYDAVSTFKISLPTPIMAGVRTPTRQFSSCVLIECGDSLDSINAT
ASSIVKYVSQRAGIGVNAGRIRALGSPIRGGEAFHTGCLPFFKYFQTAVKSCSQGGVRGG
AATLFYPLWHLEVESLLVLKNNRGVEDNRVRHLDYGVQLNKLMYQRLIKGGMISLFSPSD
VPGLYDAFFADQDEFERLYLQYEADASVRKTQIKATELFSLMMQERASTGRIYIQNVDHC
NTHSPFDSKVAPIRQSNLCLEIALPTKPLNNIDDPEGEIALCTLSALNLGAIKDLSELEP
LADLAVRALDSLLDYQDYPIIAARKSSMNRRTLGIGVINFAYYLAKEGVRYSDGSANNIT
HRTFEAIQYYLLKASMNLAKEHGACPSFHETTYSKGILPIDTYKRSLDKICDEPLHMDWE
TLRQDIVKHGLRNSTLSALMPSETSSQISNATNGIEPPRGLISVKSSKDGQLKQVVPDFE
KYQHSYELLWQMPNNDGYLQLVGLMQKFVDQAISANTNYDPGRFEGNKVPMQVLLKDLLN
AYKLGLKTLYYHNTRDGASDQMDSIISVEKEDEDCEGGACKI
NT seq 2289 nt   +upstreamnt  +downstreamnt
atgaatagcaatatgaaagtcaccaaacgtagtggcaagcgcgagaacatcgacctagaa
aaaatccaccgcgtgatcacttgggcagccaaagatcttaaaaatgtgtcggtatcggaa
gtggagctcagatcacatctgcaatttttcgatggtattcctaccgaagctattcatgaa
acgattattaaggccgctgccgatctcatctcactagaagcaccagattaccagttcctt
tctgcccgcttagccatctttcatttaagaaagaaggcatttggccagtttgagcccccg
gcactgtatgatcatgttgtgaagctggtcaaggcaggtaaatatgaccaacatattctt
gaggattacagccgcgaagaactcgacatcttagatacttatgtggatcactggcgtgat
atgagtttttcctatgcggcagtcaaacaactggaaggtaagtacttggtgcaaaaccga
gtcactcacgagatatatgagagtgcgcaattcctttatatcttagtcgccgcctgtttg
ttcgctaaatatccgcaagagacacgcctaagctacattaagcgtttctatgatgcagtt
tccacctttaaaatttcactgccaacaccgatcatggctggagttcgtactcccacgcgc
caatttagctcatgtgtgttgatcgaatgtggcgatagcttagattcaatcaatgcgacg
gcctcttctatcgttaaatatgtcagccagcgcgccggcataggtgtgaatgcgggccga
attagagccttaggtagcccaatccgcggcggtgaggcattccataccggctgtctgcct
ttctttaagtatttccagaccgcggttaagtcttgttcccagggcggagttcgtggtggt
gcagccaccttgttctaccctctctggcacctcgaagtcgaatctctactggtattgaag
aataaccgtggtgtcgaagataaccgtgtccgtcatctggattacggtgtccagctgaac
aaactcatgtatcaacgcctgatcaaaggcggcatgatcagtttatttagcccatcggat
gtacctgggctttatgatgcgttttttgcagatcaagacgagttcgaacgtctgtatctt
caatatgaagccgatgcctctgtgcgcaaaacacagattaaggcgacagagctattctca
ttgatgatgcaagaacgagcctcaactggccgtatctatattcaaaatgtggatcattgc
aatacccacagtccgtttgatagtaaggttgcaccgatcagacagtcaaacctgtgtctt
gagattgcactgccgactaagccgctcaataacatagatgatccagaaggcgaaatagcc
ctctgtaccttgtctgctttaaacttaggtgcgatcaaagatctatccgaactcgaaccc
ttagcagatctggccgtgagagccttagatagcttactcgattaccaagactaccccatt
atagccgcgcgtaaatcttcgatgaaccgtcgtaccttaggcataggcgtgattaacttt
gcctattacttggcgaaggaaggggtacgctactcagatggttcggctaataacatcacc
catagaacattcgaagccatccagtactacctacttaaggcttcgatgaatttggccaaa
gagcatggtgcctgcccctcattccatgaaacaacgtattcgaagggtatactgcccatc
gatacctacaagcgttctctggataagatatgtgatgagccattgcatatggattgggaa
acactgcgtcaagacatagttaaacatggactgcgtaactcaaccttatcggctctgatg
ccgtcagagacatcatcgcagatctccaacgcgaccaatggtatcgagccaccacgtgga
ctgatcagtgttaagtcgagtaaagatggtcaactgaagcaagtggtgccagatttcgag
aagtaccagcatagctatgaactgctttggcagatgcccaataatgatggttacttgcaa
ctcgtgggtttaatgcagaagtttgtcgatcaagccatctcggccaacactaactatgat
ccaggccgattcgaaggtaacaaggtccccatgcaggtgttattgaaagacctgttaaat
gcctacaaactcggtctcaagaccctctactatcacaacactcgtgatggcgcttcggat
cagatggatagcatcatcagcgtagagaaagaagacgaagactgtgaaggcggcgcgtgt
aagatataa

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