Shewanella benthica: SHEWBE_3091
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Entry
SHEWBE_3091 CDS
T06707
Symbol
cpdB
Name
(GenBank) 2':3'-cyclic-nucleotide 2'-phosphodiesterase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
sbk
Shewanella benthica
Pathway
sbk00230
Purine metabolism
sbk00240
Pyrimidine metabolism
sbk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
SHEWBE_3091 (cpdB)
00240 Pyrimidine metabolism
SHEWBE_3091 (cpdB)
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
SHEWBE_3091 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
SHEWBE_3091 (cpdB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
DUF7436
DUF5462
Motif
Other DBs
NCBI-ProteinID:
SQH77054
UniProt:
A0A330M6M6
LinkDB
All DBs
Position
SHEWBE:2963936..2966005
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AA seq
689 aa
AA seq
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MDMFNKKVLAVIIASTLGLVACGSDNDNDVAAIQVDLRILETSDLHANIMDYDYYKTKYD
PSIGLARTASLIKQHGAEVSNFVLVDNGDLLQGSPMGDYIADNFKRDNTIGGTHPAYKAM
NTLGYSVGNLGNHEFNYGLDFLSEAIAGANFPYINANVLCEADCWEGKEKGDNLFTPYII
EEKTVIDSNGDQQTVKIGYIGFVPPQILLWDKQNLSGKVSVMGIIEAAEKFVPLMKAEGA
DVIVAIPHSGVGTPLNPTDVNDENATYALSLVEGIDVITFGHSHSVFPSATFAGLENADL
EKGTINGVAAVMPGRWGDNLGIVDLKLEMQDGAWVIIDRTAKAVPIYDKKADQPELVEAD
IAIRDAVAIEHQGTLDYVNQPIGRASADMYSFLTLVQDDPSVQIVSDAQIAKVKANLTDA
LKDIPVLSAAAPFKAGGRHSTTADADSYVQVPAGDLTYKNAADLYLYPNTMVVVKVTGAE
VKDWLECSANQFNQISATSTEPQYLINWDTHRTYNFDVIDGVTYKIDVTQPTKFDGDCKL
LDADANRIVGLAYTEDGIAITGDEFAKKEFIIATNNYRAFGGKFAGTGSDYVIMELPDSN
REALAQYITEESENNENNEVDPTADNNWGFVTINTSTKLDIRFETQDSKLADEFIIKYQV
RTLTKRADLTDEFGFAIYNIDLTSEASAK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtttaataaaaaagttttagcagtaattatcgcttcaacacttggccttgtg
gcttgtggctctgataatgataatgatgttgcggccattcaagtggatcttcgtattctt
gaaaccagtgatcttcatgccaacatcatggattatgattattacaaaaccaagtatgac
ccaagcataggccttgcacgaacggcgagcttgattaaacagcacggtgctgaagtgagt
aacttcgtattagtcgacaacggtgacttattgcaaggcagccccatgggcgactacatt
gccgataactttaaacgcgacaacaccataggtggcactcacccagcatataaggccatg
aatacactcggctactctgtgggtaacttaggcaaccatgagtttaactatggtctggat
ttcttaagcgaagccatagcgggcgcaaacttcccttacatcaatgctaacgtcttatgt
gaagccgattgctgggaaggcaaagagaagggggataacttattcaccccttacatcatc
gaagaaaaaacggtcatcgacagcaatggcgatcagcaaacggttaaaattggctatatc
ggcttcgtgcctcctcagatattactctgggataagcagaacctatccggcaaagtttcc
gttatgggtattatcgaagccgctgaaaaattcgtgccactaatgaaagcagagggcgcc
gatgttatcgtcgctattccacactcaggcgtgggcacacctttaaatcctaccgatgtc
aacgacgaaaatgccacttacgcgctatctctggtagaaggtatcgatgtgataaccttt
ggtcacagccactcagtatttccgtcggcaacatttgcaggcctggaaaatgccgatctg
gagaaagggactatcaatggtgtggctgccgtcatgcctggccgttggggtgataactta
ggcatagtcgatctaaaacttgagatgcaagacggtgcatgggttattatcgaccgcacc
gcaaaagccgtgcctatctatgacaaaaaagctgaccagcctgaattagtagaggcagat
attgctattcgagacgccgttgcaatcgaacaccaaggtacacttgactatgtcaaccag
ccgataggtagagcgtccgccgacatgtacagcttcctcaccttagtgcaagatgatcca
tcggtacagattgtctccgatgctcagatagccaaagtaaaggctaacctcactgacgcg
ttaaaagatattccggtattatctgccgcagcaccttttaaagcaggtgggcgtcacagc
actaccgccgatgcagactcctatgtgcaagttccagctggcgatttgacctacaaaaat
gcagcggatctttatctatatccaaataccatggtggtagtaaaagtcactggggcggaa
gttaaagattggctagagtgcagtgcaaaccaatttaaccaaatatcagcaacctctaca
gagccgcagtatttgatcaattgggacacacacagaacctacaacttcgatgtcatcgat
ggcgtcacctataagattgatgtgacgcaaccgactaagtttgatggtgattgtaaactg
cttgatgccgatgccaaccgtatcgtcggtctagcttataccgaggacggaatagcaatc
actggcgatgaatttgctaaaaaagagttcatcatagcgaccaacaactaccgcgcattc
ggtggtaaatttgcgggtacaggttcagattacgtcatcatggagctgccggatagcaac
cgtgaagccctggctcagtacatcactgaagagagtgagaataatgagaataatgaagta
gatccaacggcagacaacaactggggcttcgtgacgatcaacaccagcactaagttggat
attcgcttcgaaactcaggacagtaagctcgctgacgagtttattattaagtatcaagta
cgtacgttaaccaaacgtgctgacttaactgatgaatttggtttcgccatctacaatata
gacttaacaagcgaagctagcgctaagtaa
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