Shewanella benthica: SHEWBE_3201
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Entry
SHEWBE_3201 CDS
T06707
Symbol
msbA
Name
(GenBank) fused lipid transporter subunits of ABC superfamily: membrane component; ATP-binding component
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
sbk
Shewanella benthica
Pathway
sbk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHEWBE_3201 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_3201 (msbA)
Enzymes [BR:
sbk01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
SHEWBE_3201 (msbA)
Transporters [BR:
sbk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SHEWBE_3201 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
nSTAND3
APS_kinase
AAA_29
AAA_22
AAA_23
AAA_24
DEAD
RsgA_GTPase
ABC_ATPase
AAA_16
AAA_15
NB-ARC
AAA_25
PRK
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
SQH77164
UniProt:
A0A330M6Y9
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All DBs
Position
SHEWBE:complement(3058641..3060461)
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AA seq
606 aa
AA seq
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MTNSSNQEVWTVFKRLMGYIKPLKVVFGFAVLGLFMYAAVDATFIAVIKPFIDGGFGGQV
SQVTSSSAVANIDLGTSDGFGASNDVLMMAPIVVIVLFSLRGLANFLSTYCISFMSARLI
MDLRQEVFEHYLTLPVSYIDRENSGNLISRVTYDTEQIARATGSALISIVRDSITVVGML
AIMFFYSWKLSLCILVIGPIIGLIISIVSKRFRKVSKRIQAAMGGVTAATEQMIKGHKNV
LAFGGQETESARFALVNEQNRYQNMKLALAQSISQPLVMVIGSFALAFVLYAASFEGMQE
ELTAGTFATILGAMLAMLQPIKSLTRVNAEFQRGIAASTTVFELLDTQPEVDNGSYKVAR
VKGELSFNQVSFRYPNQEKLALNKIDFSVKQGQTIALVGRSGSGKSTIASLITRFYTGLE
AGSIELDGVNIDDFELKNLRSQVALVSQQVTLFNDTIGNNIAYAYPGEVTQEQIIEAATL
AHAMEFIELLPEGLDTQVGENGVLLSGGQRQRIAIARAILRNAPILILDEATSALDTESE
KAIQLGLDNLRHNRTSIVIAHRLSTIESADQILVIDQGEVVERGDHQSLLAQDGVYANLY
KMQFSR
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacaaactcttcaaatcaagaagtctggaccgtatttaagcgcctaatgggctatatc
aagccattgaaagtcgtgttcggcttcgccgttcttggcttgttcatgtatgccgcagtc
gatgccacctttatcgccgtgattaagccctttatcgatggtggcttcggcggtcaagtc
agtcaggtgacttcatcatcggctgtcgccaatattgatcttggcactagtgatggtttt
ggcgcatcgaatgatgtgctgatgatggcgcctatcgtcgtcatcgtgctttttagcttg
cgtggcttggctaattttctatctacctactgcatctctttcatgagtgcacgcctgatc
atggatttgcgccaagaagtattcgagcattacctcacccttccagtgagttacattgat
agggagaactcaggtaatcttatctcccgtgtcacctatgataccgagcagatagcgcgt
gctacaggtagcgcgctgatcagtatcgttagagatagcatcactgtggtcggcatgctc
gctatcatgttcttctactcctggaagttatctctgtgtattttggtcatcggtcctatc
ataggtttgatcatctccatcgtcagtaaacgttttcgcaaagtctctaagcgaatacaa
gccgcgatgggcggtgtgaccgcagcaactgagcagatgatcaaaggtcataaaaatgta
ctggcttttggcggtcaggaaactgaatctgcgcgtttcgctctggttaatgagcaaaat
cgctatcaaaatatgaaactggctctggcacaatccatcagccaacctctggttatggtg
ataggctctttcgctctggccttcgttctgtatgctgcgagcttcgaggggatgcaagag
gagctaacggcgggaacattcgccaccattctcggtgccatgctggccatgctacagcca
atcaagagtctgactcgtgtcaacgccgagtttcagcgaggtattgccgctagtaccaca
gtgtttgaattgttagatactcaacctgaagtcgataatggcagctataaggtcgcgcgt
gtcaaaggtgagcttagctttaatcaggtgagttttcgctatccgaatcaagagaagctt
gcactgaataaaattgatttttcagtcaagcagggccagaccatcgccttagtcgggcgt
tccggctcgggtaagtcgacgatagcgagtctgatcacccgcttctatactggcctcgaa
gcggggagtatcgagcttgatggtgtcaacatagatgatttcgagctcaagaaccttcgc
agtcaagttgcactggtttcgcagcaggtgaccctgtttaacgataccatagggaataac
atcgcctatgcctaccccggggaagtgacccaagagcagatcattgaggcggcaacgctg
gcacacgccatggagtttatcgagttactgcctgaagggctagatactcaagtgggcgag
aatggtgtcttgctctccggtggtcagcgacaaagaattgccatcgctcgggctatctta
cgtaacgcgccgatactcatactcgatgaagcaacgtcggctctggataccgagtcagag
aaagccattcaattgggactggataacttgcgtcataaccgaacctcgatagtgattgct
cacagactgtcgactatcgaatctgcggatcagattttagtgatagatcaaggtgaggta
gtagagcgcggtgatcatcagtctctgctggctcaagatggcgtatacgctaacttgtat
aaaatgcagtttagtcgttaa
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