Shewanella benthica: SHEWBE_3238
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Entry
SHEWBE_3238 CDS
T06707
Symbol
dusC
Name
(GenBank) tRNA-dihydrouridine synthase C
KO
K05541
tRNA-dihydrouridine synthase C [EC:1.-.-.-]
Organism
sbk
Shewanella benthica
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbk03016
]
SHEWBE_3238 (dusC)
Transfer RNA biogenesis [BR:
sbk03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
SHEWBE_3238 (dusC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
His_biosynth
MR_MLE_C
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
SQH77201
UniProt:
A0A330M4J9
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All DBs
Position
SHEWBE:3107331..3108263
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AA seq
310 aa
AA seq
DB search
MRVILAPMEGVADASMRALLTGVGGYDLVISEFIRVVDQLLPERVFYRLCAELANQSKTR
SGTPVRLQLLGQHPQWMAENALRAIELGSLGVDLNFGCPAPMVNRNNGGAALLKEPETIY
RIVKAVREAVPEPLPATAKIRLGWDDKSRCVEIAQAIEAAGATELTVHARTKEEGYKPPA
HWEYIRQIKQAISIPVIANGEVWSREDYLECQRVSQCDDVMIGRGALAVPNLAQVIKGCQ
TKMPWPEVLQLLLQYSDDEIVSEKEKYYPARIKQWLKFIAKQYNEADELFTQVRVLKKTP
EILSLLRALT
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgtaatactcgccccaatggaaggcgtcgccgatgcgtctatgcgagcactcctg
accggtgtcggtggatacgatctggtgatcagtgagtttattcgcgtggtggatcaactc
ctgccggaaagagtcttctatcgcctatgcgccgaattggctaatcagagtaagactagg
tccggcaccccggtcagattacagttgctcggccaacacccacagtggatggcggaaaat
gccctgcgcgccatcgaacttggctcccttggtgtcgaccttaattttggctgtccagct
cccatggtcaatcgcaacaatggcggagcggcgctgctaaaagagcctgagaccatctac
cgcatagtcaaagccgtccgggaggccgtgcccgaaccactcccggcaaccgcaaagata
cgccttggttgggatgataagagtcgctgcgtcgaaatagctcaagcgattgaagccgca
ggtgccacagaactgactgtgcacgccagaaccaaggaagaaggttacaagccccctgct
cactgggaatatattcgccaaataaagcaggctatctcaatacctgtgatcgcaaatggt
gaggtgtggagccgtgaagattatctcgagtgccaacgagtcagtcagtgtgatgatgtc
atgataggccgaggcgcattggccgtacctaatttggcccaagtgatcaagggatgccaa
actaaaatgccctggcctgaagtcttacagctactgttacaatactcggacgacgaaatc
gtcagcgagaaagagaaatattatcctgctcgaataaaacagtggcttaaattcatcgca
aaacaatacaacgaagccgatgaactgtttacccaagtgagagtattgaaaaaaacgcct
gaaattctctctttactgagagcactcacataa
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