KEGG   Shewanella benthica: SHEWBE_3260
Entry
SHEWBE_3260       CDS       T06707                                 
Name
(GenBank) General secretion pathway protein A (fragment)
  KO
K02450  general secretion pathway protein A
Organism
sbk  Shewanella benthica
Brite
KEGG Orthology (KO) [BR:sbk00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sbk02044]
    SHEWBE_3260
Secretion system [BR:sbk02044]
 Type II secretion system
  General secretion pathway protein
   SHEWBE_3260
SSDB
Motif
Pfam: AAA_22 AAA_16 cobW nSTAND1 ATPase_2 SLFN-g3_helicase NPHP3_N AAA_19 AAA_30 KAP_NTPase AAA_24 T2SSE AAA_25 nSTAND3 AAA AAA_18 AAA_14 AAA_29 G-alpha ABC_tran TsaE NACHT AAA_33 AAA_7 AAA_28 TrwB_AAD_bind Cdc6-ORC-like_ATPase_lid NTPase_1 Mg_chelatase SRP54 PIF1 MobB AAA_5 AAA_11 DAP3 ATP_bind_1 AAA_lid_4 Sigma54_activ_2 SRPRB CbiA Zeta_toxin AAA_23
Other DBs
NCBI-ProteinID: SQH77223
UniProt: A0A330M6Z6
LinkDB
Position
SHEWBE:3132320..3133264
AA seq 314 aa
MFNAFYRLNENPFSPDLVLNGPYLSESHAEALTHLSYGVSETGGFILLTGDEGSGKTTLL
SNLIEHLPKDTDVAVIHNPAVNEIELLADLCDALSIEYHESNLKHLIDCLSAFLQSNHDK
GRTSVLVIDNAQHLSNNLLEQLRLLTNLETDTQKLLQIILVGRPELKQHLNQQALRQVAQ
RITVRYHLASLTKTEILGFIAHRLRACGLNEPLFKHSAIKLIAKYSAGNPKLINQLSERV
LMTAYGQSQSSIDGRITQVAIAEALGTDKTKPGKIVSPAIAASLMLTCILGYRIWQVAET
QLAPESLTTRLSTN
NT seq 945 nt   +upstreamnt  +downstreamnt
atgtttaatgcgttttatcgactcaatgaaaacccattttccccagaccttgtgctcaat
ggcccctatctcagcgagagtcatgctgaggcattgacgcaccttagctatggagtgagc
gagactggtggcttcatcctgctcaccggtgatgaaggcagcggcaaaaccaccttatta
agcaacttaatcgaacatctgccaaaagacacagatgttgctgtgattcataacccagcc
gtaaatgaaattgagctattggccgatttatgtgatgccttgtcgattgaataccatgaa
tcgaatttgaaacacttgatcgattgtttgagtgcttttttacagtcgaatcatgacaag
ggacgcacgagtgttttagtgatcgataatgcccagcatctgagtaataacctgctggag
caattaagactattgactaacctggaaaccgatactcaaaaactgctgcaaataatatta
gttggccgacccgagttaaagcagcatctaaaccaacaagccctgagacaagtcgcccaa
aggatcaccgtcagatatcatttagcgtcactgacaaagacagaaatattaggtttcatc
gcacataggctcagagcctgcggcttgaatgaaccactatttaagcactcggccatcaaa
ctcatcgctaaatacagtgcaggaaatcccaagctgattaatcagctatctgagcgagta
ttaatgacagcttatggccaatctcagagcagcatagatggcagaatcactcaggttgcc
atcgccgaggccctggggactgacaagactaagcctggaaaaatagtgagtccagcaata
gccgcctccctgatgttgacatgcattttaggttatagaatatggcaagtagcggaaact
caacttgcacctgagtcattaacgacgcgactatcgaccaattaa

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