Shewanella benthica: SHEWBE_3437
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Entry
SHEWBE_3437 CDS
T06707
Name
(GenBank) putative Capsular polysaccharide export protein
KO
K01991
polysaccharide biosynthesis/export protein
Organism
sbk
Shewanella benthica
Pathway
sbk02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SHEWBE_3437
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_3437
Transporters [BR:
sbk02000
]
Other transporters
Pores ion channels [TC:
1
]
SHEWBE_3437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Poly_export
SLBB_2
SLBB
Motif
Other DBs
NCBI-ProteinID:
SQH77400
UniProt:
A0A330M8R6
LinkDB
All DBs
Position
SHEWBE:3306244..3307317
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AA seq
357 aa
AA seq
DB search
MHNFILFTRLLALTLVLSSCASLDPSSKAPLELPLALQKMADVETLDEPMHITQQRREQE
LTKLHQVKPGTYEISAGDKFNVFVYGEPDLDSKQAIVKLDGSLTFKLIGDVQIAGKTVPQ
ATALIEKELQRYIHFPKVTLMPYDMRSASITIIGKVIHPGVYYFDGSLRAAEAIGLAGGF
STGIFNDNTIELADLEHSYIQRGEYLLPVDLTKLIRKGNMHHNVPLIDGDYVYIASAMSQ
EVFITGEVHKPSYYGYSERMTLARLVSRAQGLLLSANSHVLVIRGNIKHPLVYKVNIDKI
LTGETRDFLIQPNDLVYVPKSMIGSWNALLTQLMPTLETMLTGLLLERRVYDLQIRN
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgcataactttatcctgttcactcgattacttgcactgacgcttgtgttatccagctgt
gccagcctggacccgagtagtaaagcgccccttgaattacccttagcgctacaaaaaatg
gctgatgttgagactttagatgagccaatgcacattactcaacagcgccgagagcaagaa
ttaaccaaattacatcaggtgaaacccggtacttatgaaatttcagccggggataaattt
aatgtctttgtttatggcgagcctgatttagacagtaaacaggcgatagtaaaactcgat
ggtagcctcacttttaagctcattggtgatgtacaaattgcggggaaaaccgtgccacag
gccactgccctaattgaaaaagaattacaacgttatattcactttcctaaggtgaccctg
atgccctacgacatgcgtagtgcatccatcaccatcataggtaaagtcattcaccccggc
gtatattacttcgatggttcactcagagccgccgaagccattggccttgcaggcggattc
tccacgggtatttttaacgacaacaccatcgagttagcggatctagaacactcttatatc
caacgaggagaatacttattacccgttgatttaaccaagcttattcgtaaaggaaatatg
catcacaatgtccccttaatcgacggcgattacgtttatattgcctctgccatgagccag
gaagttttcatcacaggtgaagtccataagccgagctattatggctacagtgaacgcatg
accctagcgcgcctagtgtccagagcgcaaggcctattactttccgccaatagccatgta
ctggtgatccgcggcaacatcaaacaccccttggtctataaggtcaacatagacaagatt
ctcaccggggaaacccgcgactttttgatccagcccaacgatttggtttacgtgcccaag
agtatgatcggctcgtggaatgcattacttactcagttaatgccgaccctggaaaccatg
ctgacaggcttattactcgaacgcagagtatacgacttacaaattcgtaattaa
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