Shewanella benthica: SHEWBE_3450
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Entry
SHEWBE_3450 CDS
T06707
Name
(GenBank) conserved membrane protein of unknown function, containing ABC transporter family ATP binding domain and transmembrane domain
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sbk
Shewanella benthica
Pathway
sbk02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SHEWBE_3450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbk02000
]
SHEWBE_3450
Transporters [BR:
sbk02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SHEWBE_3450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
Septin
AAA_16
Roc
AAA_24
AAA_15
DUF87
Motif
Other DBs
NCBI-ProteinID:
SQH77413
UniProt:
A0A330M7I1
LinkDB
All DBs
Position
SHEWBE:3319257..3321086
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AA seq
609 aa
AA seq
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MFKRFESWVDPLPAAEPEQPPKGIYAFCRHYTKGFERPLILMSIITAILAVLEVSLFGFM
GQLVDLLIANDPDTLFENEGLKLIGMTVLVLVVIPSLVLLHALIVYQGLLGNYPMSIRWL
AHRYLLKQSVSFYQNDFAGRIATKVMQTSLAVRETVTKLLDVLVYILVYFTSMLVMIANA
DLRLMLPMFIWLGLYIGLQFLFLPRLKQVSTEQADARSNMTGRLVDSYTNITTVKLFSHT
QKEAEYAKSSMKTFLDTVYRQMRLVTGINVSVQIINYLLAFAIAAVSIWLWTTSAITVGA
IAIAISLALRLNGMSQWIMWEISSLFENIGTVADGMNTLSQPTEIQDIKDAPKITVKKGA
IDFTEVSFHYGENSGVIEKLNLNIKAGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGTIEI
DQQNIKHVQQDSLRANIGMVTQDTSLLHRSIRENILYGKPEASEEELMSAIKSAQAYDFI
QTLTDAEGNQGLDAQVGERGVKLSGGQRQRIAIARVLLKNAPILLLDEATSALDSEIEAA
IQESLYQLMKGKTVIAIAHRLSTIAAMDRLIVLDEGNIVEEGTHQELINAGGIYAQLWAH
QTGGFLGLD
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacgattcgagtcatgggttgaccccctccccgcagcggagcccgaacaacct
cccaaaggaatatatgcattttgccgtcattacaccaaaggattcgaacgtccgctgata
ttaatgtccattattaccgccattctagccgtattagaagtctcattattcggcttcatg
ggccagctggtcgacttattgatagccaatgaccctgataccttgtttgagaatgaaggc
ctcaagctgatcgggatgacggtattagtcttagtggtgatcccctcgttagtcctgtta
catgcactcattgtctatcaagggctcctggggaactaccccatgtccatcagatggtta
gcccatagatatttattgaaacagagtgtttctttctatcaaaatgattttgcgggtcgt
atcgccactaaggtgatgcaaacttctttagcagtcagagagaccgtgactaaactgttg
gatgttctcgtgtacatcttagtttatttcacctctatgctggttatgatcgccaatgca
gatctacgtttaatgctacctatgtttatctggttaggcttgtatatcggcctgcagttc
ctatttttacctcgattgaagcaagtatccaccgaacaggccgatgcccgttcaaatatg
actggccgccttgtcgacagctataccaatatcaccacagtgaaactgttttcccacacc
cagaaagaagccgaatacgccaaaagcagcatgaagacatttctggataccgtgtataga
cagatgcgactcgttacaggtatcaatgtcagtgtgcagatcatcaactacctgctcgca
tttgccattgcagccgtgtcaatctggttatggacgacgagtgccatcacagtaggcgct
attgccatagccattagtctggccttaaggttgaatggcatgtcccagtggatcatgtgg
gaaataagttccttgttcgagaatataggcaccgttgccgacggtatgaacaccttgtcg
cagccgaccgagattcaagatataaaagatgcacccaagatcaccgttaaaaaaggcgcc
atcgacttcaccgaagtcagctttcattatggtgagaatagcggtgtgatcgaaaaactg
aatctcaatataaaagcgggtgagaaagttggactagtgggtcgctctggcgctgggaaa
tcgacattagtcaacctgctgatgcgcttctacgatgtagaaaaaggcactatcgaaatc
gaccagcagaatatcaaacatgttcaacaagactctctacgtgccaacataggcatggtc
acgcaagatacgtcgttgctacacagatcgattcgcgaaaatattctctatggaaagccc
gaagccagcgaagaggagctaatgagtgcaattaagagtgcacaagcctatgacttcatc
caaaccttgacggacgcagaagggaatcaaggcctagatgctcaagtgggtgaacgaggt
gtcaaactctcaggcggtcagagacaacgtatcgccattgcacgagtactcctcaagaat
gcacctatcttgctactggatgaggccacatcggcactggactcagaaatagaagccgcg
atacaagaaagcttataccagctaatgaaaggcaagacagtaatagccattgctcataga
ctctccaccatagctgcaatggatagattaattgtcttagatgaaggcaatattgttgaa
gaaggcacccatcaggaactgataaacgctggcggtatatatgctcaactatgggcacac
cagacgggtggattcctaggtctagattaa
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