Shewanella benthica: SHEWBE_3455
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Entry
SHEWBE_3455 CDS
T06707
Name
(GenBank) Transcriptional regulator, LysR family protein
Organism
sbk
Shewanella benthica
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
SQH77418
UniProt:
A0A330M5L3
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Position
SHEWBE:3328434..3329312
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AA seq
292 aa
AA seq
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MDIRQLKHLDALVKTASFTKAAQSLNMAQPALSQSIKRLESSLGVTLVNRATSGNKQLSL
TAEGKVLHQHALLIIKQLKQAEAHIKSMANLTKGEVRIGVPGMLGSFYLPSRLMAFRHQY
PDLKLCLFEGGTRDSLKMLAREEVDIAIITAQDLSPEFDSHLLLREQLVVAMGTDHPLAE
QQSISLEAFFEHELVMFKPGYFHREWMLTQAKSLGLRANIAFETNLINLIKQLVSQGFAI
TSVLEMVIGDKDDILAKPFQPQVFLDLHIAWKKQRPISQADKAFVDFLMKNR
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atggatatacgacaacttaagcatctcgatgccctggttaaaacagccagcttcactaag
gcggcccagagcctgaatatggcccagccggccttaagccaaagtatcaaacgccttgag
agctccttaggcgtcactctggtcaacagggcaacctcaggcaacaaacagcttagtctc
accgcagaaggtaaggtgctgcatcagcatgccctgttgatcatcaagcaactgaagcag
gccgaggcccacatcaagtcaatggcaaacttgaccaagggagaggtcagaattggcgtg
ccgggtatgcttggctccttctacctcccctcacgcctgatggcatttcgccatcaatac
ccggatcttaaactgtgcctgttcgaaggcggaacccgggactcgctcaagatgcttgcc
cgtgaagaggtggatatcgccatcatcaccgcccaagatcttagtcctgaatttgacagt
cacctgttgctaagggagcagttggtagtcgccatgggaaccgatcaccccctggcagaa
cagcaaagcatcagcttagaagccttcttcgaacatgagctggtgatgttcaaacccggc
tactttcatcgggaatggatgttaacccaagcaaaatccttggggctcagagccaatatt
gccttcgaaaccaaccttatcaacctcattaaacaactagtatcacaaggttttgccatc
accagcgtgctggagatggtgatcggcgataaggacgatattttggctaaaccttttcag
ccgcaagtgtttctcgatctgcatatcgcctggaaaaaacaacgtcccatcagtcaggca
gacaaggctttcgtagatttcttgatgaaaaacagatga
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