Shewanella benthica: SHEWBE_3472
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Entry
SHEWBE_3472 CDS
T06707
Name
(GenBank) Histidine kinase
Organism
sbk
Shewanella benthica
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_9
HATPase_c
PAS
HisKA
PAS_8
Diguanyl_cycl_sensor
PAS_4
Hpt
HAMP
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
SQH77435
UniProt:
A0A330M636
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Position
SHEWBE:complement(3343989..3347519)
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AA seq
1176 aa
AA seq
DB search
MTFRLKTVLGIALIEGVLLMLLVYTSVDYLKSSNQAEIEKRARSVVTLFAAAAKDAVIST
DISTLQELSSELLDSTQVLYVAIYDRNNLLVSAGEPSLISVSDRSFANDETLAKVAGGFV
NIEDGVLDVRADIIESGFVFGRVELGISIHEFDQFLARATTRFSSIAGLEMLLVALFSWL
LGSYLTKNLSELKRASKRILQGETGVQIPVNSHDEIGQTTQAFNRMIEKIEKNAQELESA
NIRLSTILAAAVDGFIIIDTQGIIVQVNPAVGHLFGYDNNELIGHNVSIFMPSHERHMQN
DFLMRFINSKSDVLQGKGRELVAQHKSGKLFPIDLSVSKMLIDGDVMLLGLVKDLSDIKR
KEAEAKRTESILLATLEASQDALITIDITGRIQEFNEAASQLFGHSREQALGEILEELIF
VDIERKAFKEELEIFRKTGCGPAIKKSVELMSIRADGTHFPVEMKMIPVQLGDEILLTAF
LHDVSERMQYETELKQAKEQAELGSKAKSRFLATMSHEIRSPLNAVLGGVELMLDSKLNK
DQRIYAHTAKEAGTALLSTINDILDFSKIEAGQMVLKNMRFSPAKMVAQVMQILAPKAHE
KGVNLATFINRNVPALVKGDAQRLRQVLHNLVDNAIKFSSGGCISVEMWIPDGHHQEVQL
HCAVTDEGIGISLSAQKKLFQEFSQVHDQHNTNYTGTGLGLAICSELITMMGGEIELSSR
LGHGSCFRFNVRLQLEEQRGSFIHIPAHARVLLVHPDKTFSHLVRKQYSQYGVQTVNVSQ
LTDIFKIEAVKGRFNLILIDDTSLSQLSLNLSNQFKRDFLCEDGLIAALMSGLSPEMPVV
LADIGLEQVINKPLSREMLLGLLSGESLDESDTREVETLLPELTLRNKRLLLAEDSPSNR
VIAGAMLAKSGFEVEFAHNGKEAVKMSAEHDYGLILMDMRMPEMDGVEATREILLAQPDT
VILAMTANVSKEDVESCLDAGMKDFVAKPVNQLELVKAINKWLPYSDVVELQSKHTLAKE
ENSDKPCEASVEELSLIKESTIDDIMNVKTDGPHVTNNETLLSDRLFDELVLSELVDALG
PESMKGMFNVYLEETHERLEKLASLKLSMNFNEIDDQAHTLKSSSGSFGAHALYEVAKCL
EQSARDKDKNEVESYMLEVQEIGERTIKAFRERFAA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttagactcaaaacggtattaggcatcgcgctaattgagggcgtacttttgatg
ctgctggtttataccagtgtcgattatctcaagagttccaatcaggctgagattgaaaaa
cgtgcgcgttcagtggtgacgttatttgccgcggcggctaaagatgcggttattagcaca
gatatctccactttacaggagctgtccagtgagctactcgacagtactcaggtcttatat
gtggccatttatgatcggaataacttgctcgtcagcgcgggagaaccaagcctgatttcg
gttagcgatcgatcattcgccaatgacgagacgttagctaaagtggctggtggctttgtc
aatatcgaggatggtgtgctcgatgtgagggccgatattattgagtcaggatttgtgttc
ggccgtgttgaactggggatcagtatccatgaattcgatcagtttttagccagggctacg
acgcgtttcagttcgattgccgggttagagatgttgttagttgcgcttttttcttggtta
ttgggcagttatttgaccaaaaacttgagtgagttgaaacgggcatcgaagagaatactc
cagggggaaaccggggttcaaatcccggtgaatagccatgatgagataggtcaaactact
caggcattcaatcgtatgattgaaaaaattgagaaaaatgctcaggagcttgagagtgcc
aatattcgcctcagtacgattttagccgccgccgtggatggctttatcatcatagatact
caagggatcatcgttcaggttaacccggccgtcggccacctttttggttatgataacaat
gagttgattggccacaatgtatccatcttcatgccgagtcacgaacggcacatgcaaaat
gatttcctgatgcgttttattaactctaaaagtgatgtgttacaaggcaagggaagggag
ctggtggcgcaacataagagtggtaagctttttcccatcgacctgtccgtctctaagatg
ttgatcgatggcgacgtcatgttattgggtttagtgaaagacttaagtgatataaaacgc
aaagaggcggaggctaaacggaccgagtcgattctactggcgacactcgaggcgagccaa
gatgcactcattaccatagacatcaccgggcgtattcaagagtttaatgaagcggccagc
cagctgtttggccatagtcgtgaacaggctctgggggagattttagaggagctgattttt
gtcgatatcgagagaaaggcgttcaaggaagagttggagattttcaggaaaaccggttgt
ggtccagccataaagaagagcgtagaactcatgtccattcgggccgatggcactcacttt
ccagtcgagatgaagatgatcccggtgcagctgggtgatgagatcttactcacagccttt
ttacacgatgtttcagagcgtatgcagtatgagactgagttaaaacaggctaaggagcag
gctgaattaggcagtaaggctaaatccagattccttgccaccatgagtcatgaaattcgc
tccccattgaatgccgtgttaggtggagtcgagctgatgctggactctaagctgaataaa
gatcaacgtatctatgcgcatacggctaaagaggccggtaccgccctactgagtaccatc
aatgatattttagatttttccaagatcgaagcgggacagatggtgttgaaaaatatgcgc
ttctcgccggctaagatggtggctcaggtgatgcagattttagcgcctaaagcccatgag
aaaggcgtcaacttagcgacatttattaatcggaatgtcccagctctcgtcaagggagat
gcacaacgattgcgtcaggtactgcataacctcgtcgataatgcgattaaattctccagt
ggtggctgcatttcggtagagatgtggatccccgatggtcatcaccaggaggtgcaactt
cattgtgccgtcaccgatgaaggcataggcattagtctgtcggcgcagaagaaactgttt
caagagtttagtcaggttcatgatcaacataataccaattacaccggcaccggattaggc
ttagccatttgttccgagttaatcaccatgatggggggggagatcgagctgagtagtcgt
cttggacatggcagttgtttcagattcaacgtacgcttacagctagaggaacaaagaggc
agttttatccacattcctgcacacgcgagagtcttgctggttcaccccgataagaccttt
tctcacctggtcagaaaacagtacagccagtatggggtgcagaccgtcaatgtgagtcaa
ctcacggacattttcaaaatagaagcggtgaaaggcaggtttaatcttatattgatcgat
gatactagtttatctcagctgagcttaaatttatcgaatcaatttaagcgagactttctg
tgcgaagatggcttaattgccgccttgatgtcgggattaagtcctgagatgcctgtggtc
ctggccgatatcggcttagagcaagtgatcaataaacccttgagtcgagagatgttgctt
ggtttactcagtggcgagagtctggatgaatcagacaccagagaggtcgagaccttatta
cctgagttaacattgaggaataaacgtctattgctagcagaagacagcccatcaaatcga
gtcatagccggggccatgttagcaaaatcgggtttcgaagttgaattcgcccataacggc
aaagaggcggttaagatgtcagccgaacatgattacggcttgatattgatggatatgcgc
atgcctgagatggacggtgtcgaagcgacgcgagagattttgctcgctcagcccgatacc
gtgatattggccatgacggccaatgtgtcgaaagaggatgtagagtcttgcctcgatgcc
ggcatgaaagactttgtcgcgaaaccggtaaatcagcttgaactagtgaaggcgatcaac
aaatggcttccctactcagatgtcgttgagctgcaaagcaaacatactttggctaaagag
gaaaattctgacaaaccttgtgaagcaagtgttgaggaattaagcttgattaaagaatcc
accatagacgatatcatgaatgtgaaaacggatggcccacatgtgacaaataatgaaacg
ctcctgtcggacagattattcgacgagctagtgctgtctgagctggtcgatgccctggga
ccagagtccatgaaaggcatgttcaatgtctaccttgaagagacccatgagcgtttagag
aagttagcatcattgaaactgtcgatgaattttaacgagatagatgatcaggctcatacc
ttgaaaagtagctcaggcagttttggcgctcatgccctttatgaagtggctaaatgtctg
gaacaaagtgcccgagataaagataaaaatgaggtcgagtcctatatgttagaagtacaa
gagattggagagcggaccataaaagccttcagggagcgctttgccgcttag
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